Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CLTCL1P53675 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CLTCL1P53675 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CLTCL1P53675 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CLTCL1P53675 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC30.39■■■□□ 2.46
CLTCL1P53675 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC30.39■■■□□ 2.46
CLTCL1P53675 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CLTCL1P53675 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CLTCL1P53675 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
CLTCL1P53675 BET1L-207ENST00000529614 560 ntTSL 5 BASIC30.39■■■□□ 2.46
CLTCL1P53675 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CLTCL1P53675 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CLTCL1P53675 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.45
CLTCL1P53675 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC30.38■■■□□ 2.45
CLTCL1P53675 PBX1-209ENST00000485769 834 ntTSL 2 BASIC30.38■■■□□ 2.45
CLTCL1P53675 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC30.38■■■□□ 2.45
CLTCL1P53675 FAM21FP-204ENST00000608637 956 ntBASIC30.38■■■□□ 2.45
CLTCL1P53675 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC30.38■■■□□ 2.45
CLTCL1P53675 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
CLTCL1P53675 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC30.37■■■□□ 2.45
CLTCL1P53675 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC30.37■■■□□ 2.45
CLTCL1P53675 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC30.37■■■□□ 2.45
CLTCL1P53675 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC30.37■■■□□ 2.45
CLTCL1P53675 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC30.37■■■□□ 2.45
CLTCL1P53675 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CLTCL1P53675 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
CLTCL1P53675 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CLTCL1P53675 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
CLTCL1P53675 OR2A1-AS1-201ENST00000462305 773 ntBASIC30.36■■■□□ 2.45
CLTCL1P53675 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC30.36■■■□□ 2.45
CLTCL1P53675 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC30.36■■■□□ 2.45
CLTCL1P53675 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
CLTCL1P53675 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC30.36■■■□□ 2.45
CLTCL1P53675 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CLTCL1P53675 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CLTCL1P53675 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC30.36■■■□□ 2.45
CLTCL1P53675 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CLTCL1P53675 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC30.36■■■□□ 2.45
CLTCL1P53675 SERPINH1P1-201ENST00000419794 1249 ntBASIC30.36■■■□□ 2.45
CLTCL1P53675 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CLTCL1P53675 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CLTCL1P53675 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC30.35■■■□□ 2.45
CLTCL1P53675 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CLTCL1P53675 C9orf163-202ENST00000624034 2573 ntBASIC30.35■■■□□ 2.45
CLTCL1P53675 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
CLTCL1P53675 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC30.35■■■□□ 2.45
CLTCL1P53675 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC30.35■■■□□ 2.45
CLTCL1P53675 AC097658.1-201ENST00000475555 843 ntBASIC30.35■■■□□ 2.45
CLTCL1P53675 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC30.35■■■□□ 2.45
CLTCL1P53675 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CLTCL1P53675 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC30.35■■■□□ 2.45
CLTCL1P53675 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CLTCL1P53675 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC30.34■■■□□ 2.45
CLTCL1P53675 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC30.34■■■□□ 2.45
CLTCL1P53675 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CLTCL1P53675 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CLTCL1P53675 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CLTCL1P53675 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CLTCL1P53675 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CLTCL1P53675 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC30.34■■■□□ 2.45
CLTCL1P53675 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC30.34■■■□□ 2.45
CLTCL1P53675 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CLTCL1P53675 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
CLTCL1P53675 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CLTCL1P53675 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC30.34■■■□□ 2.45
CLTCL1P53675 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CLTCL1P53675 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC30.34■■■□□ 2.45
CLTCL1P53675 UNC93B5-201ENST00000530315 699 ntBASIC30.33■■■□□ 2.45
CLTCL1P53675 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC30.33■■■□□ 2.45
CLTCL1P53675 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC30.33■■■□□ 2.45
CLTCL1P53675 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CLTCL1P53675 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
CLTCL1P53675 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CLTCL1P53675 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CLTCL1P53675 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC30.33■■■□□ 2.45
CLTCL1P53675 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
CLTCL1P53675 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CLTCL1P53675 AC245052.3-201ENST00000450182 901 ntBASIC30.33■■■□□ 2.45
CLTCL1P53675 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC30.33■■■□□ 2.45
CLTCL1P53675 CASP6-205ENST00000505486 538 ntTSL 4 BASIC30.33■■■□□ 2.45
CLTCL1P53675 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC30.32■■■□□ 2.44
CLTCL1P53675 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
CLTCL1P53675 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 CYP2T3P-201ENST00000601990 817 ntBASIC30.32■■■□□ 2.44
CLTCL1P53675 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CLTCL1P53675 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CLTCL1P53675 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CLTCL1P53675 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms