Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
LBX1P52954 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
LBX1P52954 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.2■■□□□ 1.46
LBX1P52954 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LBX1P52954 KRASP1-201ENST00000407852 552 ntBASIC24.2■■□□□ 1.46
LBX1P52954 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.2■■□□□ 1.46
LBX1P52954 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.2■■□□□ 1.46
LBX1P52954 RBM42-202ENST00000586618 771 ntTSL 3 BASIC24.2■■□□□ 1.46
LBX1P52954 AC100791.3-201ENST00000617619 330 ntBASIC24.2■■□□□ 1.46
LBX1P52954 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
LBX1P52954 KRT16P2-201ENST00000414673 1423 ntBASIC24.19■■□□□ 1.46
LBX1P52954 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.19■■□□□ 1.46
LBX1P52954 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
LBX1P52954 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.19■■□□□ 1.46
LBX1P52954 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC24.19■■□□□ 1.46
LBX1P52954 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
LBX1P52954 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LBX1P52954 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
LBX1P52954 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
LBX1P52954 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
LBX1P52954 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LBX1P52954 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.18■■□□□ 1.46
LBX1P52954 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.18■■□□□ 1.46
LBX1P52954 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC24.18■■□□□ 1.46
LBX1P52954 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LBX1P52954 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.18■■□□□ 1.46
LBX1P52954 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.18■■□□□ 1.46
LBX1P52954 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.18■■□□□ 1.46
LBX1P52954 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.18■■□□□ 1.46
LBX1P52954 Six3os1_6.1-201ENST00000620790 196 ntBASIC24.18■■□□□ 1.46
LBX1P52954 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC24.18■■□□□ 1.46
LBX1P52954 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LBX1P52954 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LBX1P52954 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LBX1P52954 OR7E47P-201ENST00000546390 1422 ntBASIC24.18■■□□□ 1.46
LBX1P52954 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LBX1P52954 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
LBX1P52954 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
LBX1P52954 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.17■■□□□ 1.46
LBX1P52954 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LBX1P52954 AL355355.2-201ENST00000442321 338 ntBASIC24.17■■□□□ 1.46
LBX1P52954 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.17■■□□□ 1.46
LBX1P52954 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.17■■□□□ 1.46
LBX1P52954 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
LBX1P52954 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.17■■□□□ 1.46
LBX1P52954 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
LBX1P52954 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LBX1P52954 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LBX1P52954 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LBX1P52954 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LBX1P52954 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LBX1P52954 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.16■■□□□ 1.46
LBX1P52954 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LBX1P52954 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC24.16■■□□□ 1.46
LBX1P52954 AC104076.2-201ENST00000448912 469 ntBASIC24.16■■□□□ 1.46
LBX1P52954 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.16■■□□□ 1.46
LBX1P52954 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC24.16■■□□□ 1.46
LBX1P52954 KRT18P56-201ENST00000507275 550 ntBASIC24.16■■□□□ 1.46
LBX1P52954 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC24.16■■□□□ 1.46
LBX1P52954 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC24.16■■□□□ 1.46
LBX1P52954 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.16■■□□□ 1.46
LBX1P52954 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC24.16■■□□□ 1.46
LBX1P52954 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LBX1P52954 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.16■■□□□ 1.46
LBX1P52954 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LBX1P52954 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LBX1P52954 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
LBX1P52954 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.15■■□□□ 1.46
LBX1P52954 LINC00543-201ENST00000567234 1845 ntBASIC24.15■■□□□ 1.46
LBX1P52954 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
LBX1P52954 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
LBX1P52954 TERF1P1-201ENST00000311003 1181 ntBASIC24.15■■□□□ 1.46
LBX1P52954 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
LBX1P52954 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC24.15■■□□□ 1.46
LBX1P52954 AL137013.1-201ENST00000432946 1228 ntBASIC24.15■■□□□ 1.46
LBX1P52954 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
LBX1P52954 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.15■■□□□ 1.46
LBX1P52954 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.15■■□□□ 1.46
LBX1P52954 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC24.15■■□□□ 1.46
LBX1P52954 CABP2-204ENST00000636477 941 ntTSL 5 BASIC24.15■■□□□ 1.46
LBX1P52954 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.14■■□□□ 1.46
LBX1P52954 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.14■■□□□ 1.46
LBX1P52954 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
LBX1P52954 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
LBX1P52954 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LBX1P52954 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LBX1P52954 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.14■■□□□ 1.45
LBX1P52954 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
LBX1P52954 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.14■■□□□ 1.45
LBX1P52954 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.14■■□□□ 1.45
LBX1P52954 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC24.14■■□□□ 1.45
LBX1P52954 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
LBX1P52954 KRT8P9-201ENST00000558927 1449 ntBASIC24.14■■□□□ 1.45
LBX1P52954 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.14■■□□□ 1.45
LBX1P52954 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.14■■□□□ 1.45
LBX1P52954 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LBX1P52954 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.45
LBX1P52954 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
LBX1P52954 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
LBX1P52954 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms