Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 AC100791.3-201ENST00000617619 330 ntBASIC20.08■□□□□ 0.8
KNTC1P50748 REXO1L12P-201ENST00000622156 912 ntBASIC20.08■□□□□ 0.8
KNTC1P50748 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.08■□□□□ 0.8
KNTC1P50748 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
KNTC1P50748 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.08■□□□□ 0.8
KNTC1P50748 AC137767.1-201ENST00000602918 1920 ntBASIC20.07■□□□□ 0.8
KNTC1P50748 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KNTC1P50748 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KNTC1P50748 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KNTC1P50748 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.07■□□□□ 0.8
KNTC1P50748 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KNTC1P50748 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KNTC1P50748 RPPH1-201ENST00000516869 333 ntBASIC20.07■□□□□ 0.8
KNTC1P50748 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KNTC1P50748 AL359736.2-201ENST00000621992 437 ntBASIC20.07■□□□□ 0.8
KNTC1P50748 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KNTC1P50748 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KNTC1P50748 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KNTC1P50748 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KNTC1P50748 LSM12P1-201ENST00000411836 588 ntBASIC20.06■□□□□ 0.8
KNTC1P50748 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.06■□□□□ 0.8
KNTC1P50748 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
KNTC1P50748 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KNTC1P50748 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KNTC1P50748 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KNTC1P50748 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KNTC1P50748 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KNTC1P50748 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KNTC1P50748 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KNTC1P50748 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.06■□□□□ 0.8
KNTC1P50748 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KNTC1P50748 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KNTC1P50748 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KNTC1P50748 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KNTC1P50748 KRT17P3-201ENST00000420566 1262 ntBASIC20.06■□□□□ 0.8
KNTC1P50748 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.06■□□□□ 0.8
KNTC1P50748 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.06■□□□□ 0.8
KNTC1P50748 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.06■□□□□ 0.8
KNTC1P50748 Z99916.2-201ENST00000604037 246 ntBASIC20.06■□□□□ 0.8
KNTC1P50748 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.06■□□□□ 0.8
KNTC1P50748 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.06■□□□□ 0.8
KNTC1P50748 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.06■□□□□ 0.8
KNTC1P50748 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KNTC1P50748 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KNTC1P50748 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KNTC1P50748 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
KNTC1P50748 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KNTC1P50748 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.05■□□□□ 0.8
KNTC1P50748 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KNTC1P50748 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.05■□□□□ 0.8
KNTC1P50748 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.05■□□□□ 0.8
KNTC1P50748 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
KNTC1P50748 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KNTC1P50748 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
KNTC1P50748 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.05■□□□□ 0.8
KNTC1P50748 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.04■□□□□ 0.8
KNTC1P50748 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.04■□□□□ 0.8
KNTC1P50748 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.04■□□□□ 0.8
KNTC1P50748 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.04■□□□□ 0.8
KNTC1P50748 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.04■□□□□ 0.8
KNTC1P50748 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KNTC1P50748 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.04■□□□□ 0.8
KNTC1P50748 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.04■□□□□ 0.8
KNTC1P50748 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KNTC1P50748 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KNTC1P50748 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KNTC1P50748 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KNTC1P50748 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.04■□□□□ 0.8
KNTC1P50748 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KNTC1P50748 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.04■□□□□ 0.8
KNTC1P50748 LINC01023-201ENST00000606054 436 ntBASIC20.04■□□□□ 0.8
KNTC1P50748 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.04■□□□□ 0.8
KNTC1P50748 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KNTC1P50748 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KNTC1P50748 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.04■□□□□ 0.8
KNTC1P50748 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.04■□□□□ 0.8
KNTC1P50748 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.04■□□□□ 0.8
KNTC1P50748 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KNTC1P50748 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KNTC1P50748 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.03■□□□□ 0.8
KNTC1P50748 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KNTC1P50748 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.03■□□□□ 0.8
KNTC1P50748 C1QBPP2-201ENST00000528754 825 ntBASIC20.03■□□□□ 0.8
KNTC1P50748 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KNTC1P50748 CYP2T3P-201ENST00000601990 817 ntBASIC20.03■□□□□ 0.8
KNTC1P50748 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KNTC1P50748 FAM210CP-201ENST00000445714 574 ntBASIC20.03■□□□□ 0.8
KNTC1P50748 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KNTC1P50748 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
KNTC1P50748 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.02■□□□□ 0.8
KNTC1P50748 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KNTC1P50748 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KNTC1P50748 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KNTC1P50748 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.02■□□□□ 0.8
KNTC1P50748 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.02■□□□□ 0.8
KNTC1P50748 PNMA6B-201ENST00000538162 1200 ntBASIC20.02■□□□□ 0.8
KNTC1P50748 AC060766.5-201ENST00000590539 871 ntBASIC20.02■□□□□ 0.8
KNTC1P50748 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KNTC1P50748 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
KNTC1P50748 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms