Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.7■□□□□ 0.9
CSNK1EP49674 AP006294.2-201ENST00000641667 209 ntBASIC20.7■□□□□ 0.9
CSNK1EP49674 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1EP49674 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1EP49674 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1EP49674 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.7■□□□□ 0.9
CSNK1EP49674 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.7■□□□□ 0.9
CSNK1EP49674 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1EP49674 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CSNK1EP49674 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
CSNK1EP49674 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CSNK1EP49674 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CSNK1EP49674 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CSNK1EP49674 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1EP49674 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.69■□□□□ 0.9
CSNK1EP49674 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1EP49674 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1EP49674 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CSNK1EP49674 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.69■□□□□ 0.9
CSNK1EP49674 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.69■□□□□ 0.9
CSNK1EP49674 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.69■□□□□ 0.9
CSNK1EP49674 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.69■□□□□ 0.9
CSNK1EP49674 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1EP49674 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CSNK1EP49674 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
CSNK1EP49674 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.69■□□□□ 0.9
CSNK1EP49674 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1EP49674 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1EP49674 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1EP49674 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1EP49674 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.69■□□□□ 0.9
CSNK1EP49674 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1EP49674 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1EP49674 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1EP49674 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CSNK1EP49674 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.68■□□□□ 0.9
CSNK1EP49674 AL355472.2-201ENST00000422958 438 ntBASIC20.68■□□□□ 0.9
CSNK1EP49674 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.68■□□□□ 0.9
CSNK1EP49674 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.68■□□□□ 0.9
CSNK1EP49674 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.68■□□□□ 0.9
CSNK1EP49674 AC142381.4-202ENST00000563973 229 ntBASIC20.68■□□□□ 0.9
CSNK1EP49674 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.68■□□□□ 0.9
CSNK1EP49674 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CSNK1EP49674 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CSNK1EP49674 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
CSNK1EP49674 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.68■□□□□ 0.9
CSNK1EP49674 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CSNK1EP49674 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CSNK1EP49674 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1EP49674 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CSNK1EP49674 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CSNK1EP49674 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.67■□□□□ 0.9
CSNK1EP49674 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.67■□□□□ 0.9
CSNK1EP49674 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CSNK1EP49674 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1EP49674 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1EP49674 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1EP49674 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1EP49674 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.67■□□□□ 0.9
CSNK1EP49674 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1EP49674 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1EP49674 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CSNK1EP49674 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1EP49674 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.66■□□□□ 0.9
CSNK1EP49674 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.66■□□□□ 0.9
CSNK1EP49674 UNC93B5-201ENST00000530315 699 ntBASIC20.66■□□□□ 0.9
CSNK1EP49674 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.66■□□□□ 0.9
CSNK1EP49674 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1EP49674 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CSNK1EP49674 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CSNK1EP49674 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.66■□□□□ 0.9
CSNK1EP49674 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1EP49674 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.66■□□□□ 0.9
CSNK1EP49674 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1EP49674 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1EP49674 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1EP49674 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1EP49674 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1EP49674 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1EP49674 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1EP49674 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1EP49674 AC092053.2-201ENST00000640557 1818 ntBASIC20.65■□□□□ 0.9
CSNK1EP49674 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1EP49674 KRT17P1-201ENST00000399211 1546 ntBASIC20.65■□□□□ 0.9
CSNK1EP49674 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1EP49674 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1EP49674 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.65■□□□□ 0.9
CSNK1EP49674 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1EP49674 AC026366.1-201ENST00000488803 879 ntBASIC20.65■□□□□ 0.9
CSNK1EP49674 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.65■□□□□ 0.9
CSNK1EP49674 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.65■□□□□ 0.9
CSNK1EP49674 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.65■□□□□ 0.9
CSNK1EP49674 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1EP49674 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.65■□□□□ 0.9
CSNK1EP49674 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1EP49674 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CSNK1EP49674 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.9
CSNK1EP49674 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.64■□□□□ 0.9
CSNK1EP49674 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CSNK1EP49674 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms