Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CCDC92B-201ENST00000575506 885 ntBASIC20.32■□□□□ 0.84
SLC6A12P48065 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC6A12P48065 AC061975.6-201ENST00000579045 1553 ntBASIC20.32■□□□□ 0.84
SLC6A12P48065 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SLC6A12P48065 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC6A12P48065 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
SLC6A12P48065 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A12P48065 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A12P48065 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC6A12P48065 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A12P48065 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A12P48065 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A12P48065 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SLC6A12P48065 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC6A12P48065 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC6A12P48065 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC6A12P48065 AC138907.5-202ENST00000569484 235 ntBASIC20.31■□□□□ 0.84
SLC6A12P48065 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC6A12P48065 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC6A12P48065 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A12P48065 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLC6A12P48065 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLC6A12P48065 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC6A12P48065 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC6A12P48065 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC6A12P48065 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC6A12P48065 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC6A12P48065 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC6A12P48065 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC6A12P48065 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC6A12P48065 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.3■□□□□ 0.84
SLC6A12P48065 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC6A12P48065 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC6A12P48065 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC6A12P48065 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC6A12P48065 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC6A12P48065 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC6A12P48065 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A12P48065 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC6A12P48065 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC6A12P48065 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A12P48065 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A12P48065 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A12P48065 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SLC6A12P48065 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A12P48065 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A12P48065 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A12P48065 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC6A12P48065 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.29■□□□□ 0.84
SLC6A12P48065 KRT18P14-201ENST00000534205 1250 ntBASIC20.29■□□□□ 0.84
SLC6A12P48065 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC6A12P48065 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC6A12P48065 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.29■□□□□ 0.84
SLC6A12P48065 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SLC6A12P48065 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A12P48065 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A12P48065 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A12P48065 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC6A12P48065 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A12P48065 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC6A12P48065 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A12P48065 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC6A12P48065 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC6A12P48065 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A12P48065 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC6A12P48065 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC6A12P48065 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.28■□□□□ 0.84
SLC6A12P48065 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A12P48065 AP004607.4-201ENST00000530158 1459 ntBASIC20.28■□□□□ 0.84
SLC6A12P48065 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A12P48065 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC6A12P48065 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A12P48065 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A12P48065 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A12P48065 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC6A12P48065 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC6A12P48065 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A12P48065 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A12P48065 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A12P48065 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SLC6A12P48065 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A12P48065 POU5F1P4-201ENST00000413175 1085 ntBASIC20.27■□□□□ 0.84
SLC6A12P48065 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC6A12P48065 AC010141.2-201ENST00000452426 721 ntBASIC20.27■□□□□ 0.84
SLC6A12P48065 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.27■□□□□ 0.84
SLC6A12P48065 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A12P48065 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC6A12P48065 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A12P48065 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SLC6A12P48065 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A12P48065 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A12P48065 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A12P48065 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SLC6A12P48065 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC6A12P48065 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SLC6A12P48065 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A12P48065 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC6A12P48065 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLC6A12P48065 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
SLC6A12P48065 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms