Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTSKP43235 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.91■□□□□ 0.94
CTSKP43235 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.91■□□□□ 0.94
CTSKP43235 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.91■□□□□ 0.94
CTSKP43235 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSKP43235 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.9■□□□□ 0.94
CTSKP43235 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.9■□□□□ 0.94
CTSKP43235 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.9■□□□□ 0.94
CTSKP43235 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.9■□□□□ 0.94
CTSKP43235 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.9■□□□□ 0.94
CTSKP43235 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CTSKP43235 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.9■□□□□ 0.94
CTSKP43235 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CTSKP43235 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSKP43235 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.9■□□□□ 0.94
CTSKP43235 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSKP43235 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTSKP43235 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.9■□□□□ 0.94
CTSKP43235 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.9■□□□□ 0.94
CTSKP43235 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSKP43235 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSKP43235 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSKP43235 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSKP43235 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSKP43235 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CTSKP43235 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTSKP43235 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTSKP43235 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.89■□□□□ 0.93
CTSKP43235 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.89■□□□□ 0.93
CTSKP43235 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CTSKP43235 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSKP43235 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
CTSKP43235 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSKP43235 AL512625.2-201ENST00000417533 625 ntBASIC20.89■□□□□ 0.93
CTSKP43235 AC008694.1-202ENST00000636953 945 ntBASIC20.89■□□□□ 0.93
CTSKP43235 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.89■□□□□ 0.93
CTSKP43235 PKD1P6-201ENST00000343738 4769 ntBASIC20.89■□□□□ 0.93
CTSKP43235 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSKP43235 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSKP43235 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.88■□□□□ 0.93
CTSKP43235 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTSKP43235 POU5F1P3-201ENST00000428824 1078 ntBASIC20.88■□□□□ 0.93
CTSKP43235 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.88■□□□□ 0.93
CTSKP43235 AC093787.1-201ENST00000450396 207 ntBASIC20.88■□□□□ 0.93
CTSKP43235 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CTSKP43235 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.88■□□□□ 0.93
CTSKP43235 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
CTSKP43235 AC069236.1-201ENST00000604339 616 ntBASIC20.88■□□□□ 0.93
CTSKP43235 AC016405.3-201ENST00000607710 860 ntBASIC20.88■□□□□ 0.93
CTSKP43235 AC008175.2-201ENST00000612840 297 ntBASIC20.88■□□□□ 0.93
CTSKP43235 AC092118.2-201ENST00000613495 667 ntBASIC20.88■□□□□ 0.93
CTSKP43235 AC120498.10-201ENST00000621827 505 ntBASIC20.88■□□□□ 0.93
CTSKP43235 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.88■□□□□ 0.93
CTSKP43235 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSKP43235 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTSKP43235 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.88■□□□□ 0.93
CTSKP43235 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSKP43235 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSKP43235 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSKP43235 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTSKP43235 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CTSKP43235 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CTSKP43235 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.87■□□□□ 0.93
CTSKP43235 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.87■□□□□ 0.93
CTSKP43235 RNA5SP413-201ENST00000516373 109 ntBASIC20.87■□□□□ 0.93
CTSKP43235 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.87■□□□□ 0.93
CTSKP43235 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.87■□□□□ 0.93
CTSKP43235 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CTSKP43235 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.87■□□□□ 0.93
CTSKP43235 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTSKP43235 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTSKP43235 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.86■□□□□ 0.93
CTSKP43235 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.86■□□□□ 0.93
CTSKP43235 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.86■□□□□ 0.93
CTSKP43235 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
CTSKP43235 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.86■□□□□ 0.93
CTSKP43235 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTSKP43235 AC008687.6-201ENST00000596318 630 ntBASIC20.86■□□□□ 0.93
CTSKP43235 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CTSKP43235 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTSKP43235 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTSKP43235 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSKP43235 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTSKP43235 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CTSKP43235 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSKP43235 POU5F1P4-201ENST00000413175 1085 ntBASIC20.85■□□□□ 0.93
CTSKP43235 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.85■□□□□ 0.93
CTSKP43235 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CTSKP43235 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CTSKP43235 ITM2C-210ENST00000620962 501 ntBASIC20.85■□□□□ 0.93
CTSKP43235 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CTSKP43235 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSKP43235 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSKP43235 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTSKP43235 C1orf229-201ENST00000623686 2258 ntBASIC20.85■□□□□ 0.93
CTSKP43235 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSKP43235 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSKP43235 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSKP43235 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSKP43235 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms