Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 RPL9AYGL147C 576 nt3.91□□□□□ -1.78
TDP1P38319 YGR117CYGR117C 1431 nt3.91□□□□□ -1.78
TDP1P38319 YGR190CYGR190C 366 nt3.91□□□□□ -1.78
TDP1P38319 MAK16YAL025C 921 nt3.91□□□□□ -1.78
TDP1P38319 YET1YKL065C 621 nt3.91□□□□□ -1.78
TDP1P38319 YLR297WYLR297W 390 nt3.91□□□□□ -1.78
TDP1P38319 snR24snR24 89 nt3.91□□□□□ -1.78
TDP1P38319 SRP1YNL189W 1629 nt3.91□□□□□ -1.78
TDP1P38319 KRE2YDR483W 1329 nt3.91□□□□□ -1.78
TDP1P38319 ACE2YLR131C 2313 nt3.9□□□□□ -1.78
TDP1P38319 SWI1YPL016W 3945 nt3.9□□□□□ -1.78
TDP1P38319 KIP3YGL216W 2418 nt3.9□□□□□ -1.78
TDP1P38319 PBP4YDL053C 558 nt3.9□□□□□ -1.79
TDP1P38319 HLR1YDR528W 1272 nt3.9□□□□□ -1.79
TDP1P38319 AML1YGR001C 747 nt3.9□□□□□ -1.79
TDP1P38319 TWF1YGR080W 999 nt3.9□□□□□ -1.79
TDP1P38319 RIM4YHL024W 2142 nt3.9□□□□□ -1.79
TDP1P38319 BET3YKR068C 582 nt3.9□□□□□ -1.79
TDP1P38319 YLR287CYLR287C 1068 nt3.9□□□□□ -1.79
TDP1P38319 BER1YLR412W 825 nt3.9□□□□□ -1.79
TDP1P38319 RPL15BYMR121C 615 nt3.9□□□□□ -1.79
TDP1P38319 YMR173W-AYMR173W-A 1185 nt3.9□□□□□ -1.79
TDP1P38319 YOL159CYOL159C 516 nt3.9□□□□□ -1.79
TDP1P38319 APD1YBR151W 951 nt3.9□□□□□ -1.79
TDP1P38319 SNU56YDR240C 1479 nt3.9□□□□□ -1.79
TDP1P38319 UTP25YIL091C 2166 nt3.9□□□□□ -1.79
TDP1P38319 GAC1YOR178C 2382 nt3.9□□□□□ -1.79
TDP1P38319 CHL1YPL008W 2586 nt3.9□□□□□ -1.79
TDP1P38319 UBP16YPL072W 1500 nt3.9□□□□□ -1.79
TDP1P38319 MLH2YLR035C 2088 nt3.9□□□□□ -1.79
TDP1P38319 PPZ1YML016C 2079 nt3.9□□□□□ -1.79
TDP1P38319 FMP25YLR077W 1752 nt3.89□□□□□ -1.79
TDP1P38319 ZDS1YMR273C 2748 nt3.89□□□□□ -1.79
TDP1P38319 AIM7YDR063W 450 nt3.89□□□□□ -1.79
TDP1P38319 BNA7YDR428C 786 nt3.89□□□□□ -1.79
TDP1P38319 PRM8YGL053W 714 nt3.89□□□□□ -1.79
TDP1P38319 YIL024CYIL024C 570 nt3.89□□□□□ -1.79
TDP1P38319 RPL40BYKR094C 387 nt3.89□□□□□ -1.79
TDP1P38319 PAM18YLR008C 507 nt3.89□□□□□ -1.79
TDP1P38319 IES3YLR052W 753 nt3.89□□□□□ -1.79
TDP1P38319 GPI15YNL038W 690 nt3.89□□□□□ -1.79
TDP1P38319 YNR034W-AYNR034W-A 297 nt3.89□□□□□ -1.79
TDP1P38319 CAT5YOR125C 702 nt3.89□□□□□ -1.79
TDP1P38319 YBR062CYBR062C 543 nt3.89□□□□□ -1.79
TDP1P38319 RTT109YLL002W 1311 nt3.89□□□□□ -1.79
TDP1P38319 BCK2YER167W 2556 nt3.89□□□□□ -1.79
TDP1P38319 MTL1YGR023W 1656 nt3.88□□□□□ -1.79
TDP1P38319 YDR381C-AYDR381C-A 345 nt3.88□□□□□ -1.79
TDP1P38319 API2YDR525W 330 nt3.88□□□□□ -1.79
TDP1P38319 VFA1YER128W 612 nt3.88□□□□□ -1.79
TDP1P38319 GET1YGL020C 708 nt3.88□□□□□ -1.79
TDP1P38319 MPC3YGR243W 441 nt3.88□□□□□ -1.79
TDP1P38319 RPS20YHL015W 366 nt3.88□□□□□ -1.79
TDP1P38319 SDL1YIL167W 633 nt3.88□□□□□ -1.79
TDP1P38319 IRC18YJL037W 675 nt3.88□□□□□ -1.79
TDP1P38319 YAL068W-AYAL068W-A 255 nt3.88□□□□□ -1.79
TDP1P38319 RPA43YOR340C 981 nt3.88□□□□□ -1.79
TDP1P38319 YPR197CYPR197C 564 nt3.88□□□□□ -1.79
TDP1P38319 FRM2YCL026C-A 582 nt3.88□□□□□ -1.79
TDP1P38319 FOX2YKR009C 2703 nt3.88□□□□□ -1.79
TDP1P38319 MTC4YBR255W 2085 nt3.88□□□□□ -1.79
TDP1P38319 PIG2YIL045W 1617 nt3.88□□□□□ -1.79
TDP1P38319 RNT1YMR239C 1416 nt3.87□□□□□ -1.79
TDP1P38319 YCR013CYCR013C 648 nt3.87□□□□□ -1.79
TDP1P38319 YHR097CYHR097C 1101 nt3.87□□□□□ -1.79
TDP1P38319 YIR036W-AYIR036W-A 402 nt3.87□□□□□ -1.79
TDP1P38319 ATP18YML081C-A 180 nt3.87□□□□□ -1.79
TDP1P38319 YMR153C-AYMR153C-A 336 nt3.87□□□□□ -1.79
TDP1P38319 MRPS9YBR146W 837 nt3.87□□□□□ -1.79
TDP1P38319 GPI10YGL142C 1851 nt3.87□□□□□ -1.79
TDP1P38319 NEL1YHR035W 1893 nt3.87□□□□□ -1.79
TDP1P38319 DAP2YHR028C 2457 nt3.86□□□□□ -1.79
TDP1P38319 ABP140YOR239W 1887 nt3.86□□□□□ -1.79
TDP1P38319 DAS1YJL149W 1992 nt3.86□□□□□ -1.79
TDP1P38319 CDC50YCR094W 1176 nt3.86□□□□□ -1.79
TDP1P38319 PMI40YER003C 1290 nt3.86□□□□□ -1.79
TDP1P38319 YER046W-AYER046W-A 330 nt3.86□□□□□ -1.79
TDP1P38319 YER068C-AYER068C-A 432 nt3.86□□□□□ -1.79
TDP1P38319 YGL088WYGL088W 366 nt3.86□□□□□ -1.79
TDP1P38319 CFD1YIL003W 882 nt3.86□□□□□ -1.79
TDP1P38319 RPS4AYJR145C 786 nt3.86□□□□□ -1.79
TDP1P38319 TPK3YKL166C 1197 nt3.86□□□□□ -1.79
TDP1P38319 PBI2YNL015W 228 nt3.86□□□□□ -1.79
TDP1P38319 DDP1YOR163W 567 nt3.86□□□□□ -1.79
TDP1P38319 YPL135C-AYPL135C-A 174 nt3.86□□□□□ -1.79
TDP1P38319 TSR1YDL060W 2367 nt3.86□□□□□ -1.79
TDP1P38319 KRE5YOR336W 4098 nt3.86□□□□□ -1.79
TDP1P38319 CDC40YDR364C 1368 nt3.86□□□□□ -1.79
TDP1P38319 PGS1YCL004W 1566 nt3.85□□□□□ -1.79
TDP1P38319 CDC5YMR001C 2118 nt3.85□□□□□ -1.79
TDP1P38319 HSP30YCR021C 999 nt3.85□□□□□ -1.79
TDP1P38319 NCB2YDR397C 441 nt3.85□□□□□ -1.79
TDP1P38319 RPL27BYDR471W 411 nt3.85□□□□□ -1.79
TDP1P38319 PET54YGR222W 882 nt3.85□□□□□ -1.79
TDP1P38319 YIL175WYIL175W 318 nt3.85□□□□□ -1.79
TDP1P38319 YJL119CYJL119C 324 nt3.85□□□□□ -1.79
TDP1P38319 VPS51YKR020W 495 nt3.85□□□□□ -1.79
TDP1P38319 YML116W-AYML116W-A 303 nt3.85□□□□□ -1.79
TDP1P38319 CMC2YBL059C-A 330 nt3.85□□□□□ -1.79
TDP1P38319 YNL181WYNL181W 1224 nt3.85□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms