Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX6P35712 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX6P35712 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX6P35712 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX6P35712 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.8■□□□□ 0.6
SOX6P35712 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX6P35712 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SOX6P35712 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX6P35712 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SOX6P35712 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SOX6P35712 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX6P35712 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.8■□□□□ 0.6
SOX6P35712 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SOX6P35712 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.8■□□□□ 0.6
SOX6P35712 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX6P35712 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX6P35712 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX6P35712 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
SOX6P35712 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SOX6P35712 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SOX6P35712 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SOX6P35712 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SOX6P35712 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.79■□□□□ 0.6
SOX6P35712 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX6P35712 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.79■□□□□ 0.6
SOX6P35712 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX6P35712 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX6P35712 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX6P35712 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX6P35712 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX6P35712 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX6P35712 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX6P35712 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.79■□□□□ 0.6
SOX6P35712 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.79■□□□□ 0.6
SOX6P35712 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.79■□□□□ 0.6
SOX6P35712 AC010980.1-201ENST00000587192 1142 ntBASIC18.79■□□□□ 0.6
SOX6P35712 AC019171.1-201ENST00000601251 1056 ntBASIC18.79■□□□□ 0.6
SOX6P35712 AC073314.1-201ENST00000568729 2216 ntBASIC18.79■□□□□ 0.6
SOX6P35712 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX6P35712 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.79■□□□□ 0.6
SOX6P35712 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX6P35712 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SOX6P35712 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.79■□□□□ 0.6
SOX6P35712 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SOX6P35712 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SOX6P35712 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX6P35712 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX6P35712 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SOX6P35712 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.78■□□□□ 0.6
SOX6P35712 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SOX6P35712 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SOX6P35712 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.78■□□□□ 0.6
SOX6P35712 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX6P35712 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SOX6P35712 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SOX6P35712 AC022616.5-201ENST00000518796 181 ntBASIC18.78■□□□□ 0.6
SOX6P35712 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX6P35712 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX6P35712 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SOX6P35712 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX6P35712 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX6P35712 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SOX6P35712 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX6P35712 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX6P35712 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.78■□□□□ 0.6
SOX6P35712 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.78■□□□□ 0.6
SOX6P35712 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX6P35712 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX6P35712 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX6P35712 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX6P35712 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SOX6P35712 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SOX6P35712 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX6P35712 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SOX6P35712 AIRN-201ENST00000601203 4374 ntBASIC18.77■□□□□ 0.6
SOX6P35712 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX6P35712 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX6P35712 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.77■□□□□ 0.6
SOX6P35712 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX6P35712 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SOX6P35712 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.77■□□□□ 0.6
SOX6P35712 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX6P35712 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX6P35712 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX6P35712 AC004687.1-201ENST00000579003 1625 ntBASIC18.77■□□□□ 0.6
SOX6P35712 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.77■□□□□ 0.6
SOX6P35712 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.77■□□□□ 0.6
SOX6P35712 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SOX6P35712 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SOX6P35712 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SOX6P35712 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SOX6P35712 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SOX6P35712 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX6P35712 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.76■□□□□ 0.59
SOX6P35712 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX6P35712 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX6P35712 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
SOX6P35712 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SOX6P35712 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
SOX6P35712 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms