Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RORAP35398 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RORAP35398 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RORAP35398 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RORAP35398 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.98■□□□□ 0.79
RORAP35398 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
RORAP35398 AC007322.4-201ENST00000509611 723 ntBASIC19.98■□□□□ 0.79
RORAP35398 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.98■□□□□ 0.79
RORAP35398 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RORAP35398 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RORAP35398 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.98■□□□□ 0.79
RORAP35398 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RORAP35398 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RORAP35398 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RORAP35398 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RORAP35398 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RORAP35398 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
RORAP35398 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RORAP35398 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RORAP35398 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RORAP35398 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.97■□□□□ 0.79
RORAP35398 AC133552.2-202ENST00000575694 574 ntBASIC19.97■□□□□ 0.79
RORAP35398 AC120498.10-201ENST00000621827 505 ntBASIC19.97■□□□□ 0.79
RORAP35398 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RORAP35398 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RORAP35398 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RORAP35398 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RORAP35398 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RORAP35398 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RORAP35398 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.97■□□□□ 0.79
RORAP35398 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RORAP35398 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RORAP35398 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.96■□□□□ 0.79
RORAP35398 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.96■□□□□ 0.79
RORAP35398 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RORAP35398 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.96■□□□□ 0.79
RORAP35398 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RORAP35398 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.96■□□□□ 0.79
RORAP35398 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RORAP35398 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.96■□□□□ 0.79
RORAP35398 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RORAP35398 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RORAP35398 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RORAP35398 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RORAP35398 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RORAP35398 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RORAP35398 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.96■□□□□ 0.79
RORAP35398 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RORAP35398 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.95■□□□□ 0.78
RORAP35398 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RORAP35398 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RORAP35398 AC068338.2-201ENST00000563278 1430 ntBASIC19.95■□□□□ 0.78
RORAP35398 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RORAP35398 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RORAP35398 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RORAP35398 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RORAP35398 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.95■□□□□ 0.78
RORAP35398 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RORAP35398 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RORAP35398 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RORAP35398 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RORAP35398 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
RORAP35398 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.94■□□□□ 0.78
RORAP35398 KRT16P2-201ENST00000414673 1423 ntBASIC19.94■□□□□ 0.78
RORAP35398 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.94■□□□□ 0.78
RORAP35398 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RORAP35398 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RORAP35398 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RORAP35398 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RORAP35398 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RORAP35398 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RORAP35398 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.94■□□□□ 0.78
RORAP35398 AF201337.1-201ENST00000520239 748 ntBASIC19.94■□□□□ 0.78
RORAP35398 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RORAP35398 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.94■□□□□ 0.78
RORAP35398 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.94■□□□□ 0.78
RORAP35398 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RORAP35398 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RORAP35398 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RORAP35398 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RORAP35398 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.94■□□□□ 0.78
RORAP35398 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RORAP35398 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.94■□□□□ 0.78
RORAP35398 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RORAP35398 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RORAP35398 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RORAP35398 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RORAP35398 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RORAP35398 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RORAP35398 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.93■□□□□ 0.78
RORAP35398 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RORAP35398 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RORAP35398 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RORAP35398 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RORAP35398 CYP2T1P-201ENST00000432607 1285 ntBASIC19.93■□□□□ 0.78
RORAP35398 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.93■□□□□ 0.78
RORAP35398 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RORAP35398 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.93■□□□□ 0.78
RORAP35398 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.93■□□□□ 0.78
RORAP35398 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms