Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SDHAP31040 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAP31040 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAP31040 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
SDHAP31040 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SDHAP31040 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SDHAP31040 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAP31040 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAP31040 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAP31040 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAP31040 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.82■□□□□ 0.6
SDHAP31040 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAP31040 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.81■□□□□ 0.6
SDHAP31040 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SDHAP31040 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAP31040 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAP31040 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.81■□□□□ 0.6
SDHAP31040 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.81■□□□□ 0.6
SDHAP31040 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.81■□□□□ 0.6
SDHAP31040 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAP31040 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAP31040 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.81■□□□□ 0.6
SDHAP31040 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.81■□□□□ 0.6
SDHAP31040 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.8■□□□□ 0.6
SDHAP31040 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SDHAP31040 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAP31040 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.8■□□□□ 0.6
SDHAP31040 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.8■□□□□ 0.6
SDHAP31040 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAP31040 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAP31040 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SDHAP31040 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAP31040 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.8■□□□□ 0.6
SDHAP31040 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAP31040 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAP31040 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAP31040 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAP31040 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAP31040 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.8■□□□□ 0.6
SDHAP31040 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAP31040 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.8■□□□□ 0.6
SDHAP31040 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
SDHAP31040 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAP31040 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAP31040 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SDHAP31040 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SDHAP31040 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAP31040 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.79■□□□□ 0.6
SDHAP31040 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.79■□□□□ 0.6
SDHAP31040 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAP31040 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAP31040 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.79■□□□□ 0.6
SDHAP31040 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SDHAP31040 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.79■□□□□ 0.6
SDHAP31040 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAP31040 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.79■□□□□ 0.6
SDHAP31040 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.79■□□□□ 0.6
SDHAP31040 AL031432.3-201ENST00000607698 485 ntBASIC18.79■□□□□ 0.6
SDHAP31040 AL136967.2-201ENST00000623968 743 ntBASIC18.79■□□□□ 0.6
SDHAP31040 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.79■□□□□ 0.6
SDHAP31040 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAP31040 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAP31040 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAP31040 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAP31040 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.79■□□□□ 0.6
SDHAP31040 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.79■□□□□ 0.6
SDHAP31040 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAP31040 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAP31040 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAP31040 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAP31040 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHAP31040 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
SDHAP31040 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHAP31040 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.78■□□□□ 0.6
SDHAP31040 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHAP31040 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SDHAP31040 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHAP31040 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHAP31040 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.78■□□□□ 0.6
SDHAP31040 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.78■□□□□ 0.6
SDHAP31040 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.78■□□□□ 0.6
SDHAP31040 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.78■□□□□ 0.6
SDHAP31040 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.78■□□□□ 0.6
SDHAP31040 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SDHAP31040 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHAP31040 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHAP31040 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.78■□□□□ 0.6
SDHAP31040 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SDHAP31040 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.77■□□□□ 0.6
SDHAP31040 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.77■□□□□ 0.6
SDHAP31040 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.77■□□□□ 0.6
SDHAP31040 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SDHAP31040 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.77■□□□□ 0.6
SDHAP31040 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SDHAP31040 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.77■□□□□ 0.6
SDHAP31040 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SDHAP31040 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SDHAP31040 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.77■□□□□ 0.6
SDHAP31040 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.77■□□□□ 0.6
SDHAP31040 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms