Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMP24386 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP24386 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP24386 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP24386 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP24386 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP24386 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.59■□□□□ 0.73
CHMP24386 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.59■□□□□ 0.73
CHMP24386 AC079089.2-201ENST00000531211 1277 ntBASIC19.59■□□□□ 0.73
CHMP24386 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.59■□□□□ 0.73
CHMP24386 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.59■□□□□ 0.73
CHMP24386 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP24386 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP24386 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
CHMP24386 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP24386 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP24386 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.58■□□□□ 0.73
CHMP24386 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP24386 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CHMP24386 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
CHMP24386 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP24386 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP24386 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP24386 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP24386 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP24386 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP24386 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP24386 AC087623.3-201ENST00000607047 1098 ntBASIC19.58■□□□□ 0.72
CHMP24386 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP24386 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP24386 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP24386 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP24386 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP24386 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP24386 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP24386 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP24386 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP24386 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CHMP24386 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP24386 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP24386 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP24386 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP24386 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP24386 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP24386 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP24386 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.57■□□□□ 0.72
CHMP24386 AC104564.3-201ENST00000582367 638 ntBASIC19.57■□□□□ 0.72
CHMP24386 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP24386 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.57■□□□□ 0.72
CHMP24386 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP24386 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP24386 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP24386 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP24386 LINC02228-203ENST00000641970 1355 ntBASIC19.57■□□□□ 0.72
CHMP24386 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CHMP24386 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CHMP24386 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CHMP24386 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP24386 BX005040.4-201ENST00000637145 1518 ntBASIC19.56■□□□□ 0.72
CHMP24386 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHMP24386 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP24386 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP24386 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHMP24386 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHMP24386 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP24386 AC034268.1-201ENST00000441047 882 ntBASIC19.56■□□□□ 0.72
CHMP24386 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.56■□□□□ 0.72
CHMP24386 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.56■□□□□ 0.72
CHMP24386 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CHMP24386 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.56■□□□□ 0.72
CHMP24386 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.56■□□□□ 0.72
CHMP24386 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHMP24386 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP24386 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CHMP24386 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CHMP24386 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP24386 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CHMP24386 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMP24386 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP24386 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CHMP24386 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP24386 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP24386 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP24386 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CHMP24386 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP24386 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.55■□□□□ 0.72
CHMP24386 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP24386 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP24386 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CHMP24386 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CHMP24386 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP24386 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP24386 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CHMP24386 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CHMP24386 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMP24386 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMP24386 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CHMP24386 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP24386 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CHMP24386 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms