Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC8.14□□□□□ -1.11
NEBP20929 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC8.14□□□□□ -1.11
NEBP20929 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC8.14□□□□□ -1.11
NEBP20929 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC8.14□□□□□ -1.11
NEBP20929 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NEBP20929 SRI-203ENST00000419179 1307 ntTSL 2 BASIC8.14□□□□□ -1.11
NEBP20929 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
NEBP20929 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NEBP20929 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NEBP20929 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC8.14□□□□□ -1.11
NEBP20929 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NEBP20929 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
NEBP20929 AL160237.2-201ENST00000556165 472 ntBASIC8.14□□□□□ -1.11
NEBP20929 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NEBP20929 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
NEBP20929 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NEBP20929 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC8.13□□□□□ -1.11
NEBP20929 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NEBP20929 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NEBP20929 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
NEBP20929 FAAHP1-202ENST00000446499 1238 ntBASIC8.13□□□□□ -1.11
NEBP20929 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NEBP20929 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NEBP20929 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
NEBP20929 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC8.13□□□□□ -1.11
NEBP20929 AC009237.3-201ENST00000393279 1427 ntBASIC8.13□□□□□ -1.11
NEBP20929 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC8.13□□□□□ -1.11
NEBP20929 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NEBP20929 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NEBP20929 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC8.13□□□□□ -1.11
NEBP20929 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC8.13□□□□□ -1.11
NEBP20929 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC8.13□□□□□ -1.11
NEBP20929 KLF2-202ENST00000592003 564 ntTSL 3 BASIC8.13□□□□□ -1.11
NEBP20929 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC8.13□□□□□ -1.11
NEBP20929 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC8.13□□□□□ -1.11
NEBP20929 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC8.13□□□□□ -1.11
NEBP20929 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC8.13□□□□□ -1.11
NEBP20929 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
NEBP20929 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC8.13□□□□□ -1.11
NEBP20929 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC8.13□□□□□ -1.11
NEBP20929 MIR1238-201ENST00000408483 83 ntBASIC8.13□□□□□ -1.11
NEBP20929 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC8.13□□□□□ -1.11
NEBP20929 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NEBP20929 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NEBP20929 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NEBP20929 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NEBP20929 KRASP1-201ENST00000407852 552 ntBASIC8.13□□□□□ -1.11
NEBP20929 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NEBP20929 PCED1CP-201ENST00000419887 785 ntBASIC8.13□□□□□ -1.11
NEBP20929 FAM197Y1-201ENST00000421178 764 ntBASIC8.13□□□□□ -1.11
NEBP20929 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
NEBP20929 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC8.13□□□□□ -1.11
NEBP20929 AL671277.2-201ENST00000458060 996 ntBASIC8.13□□□□□ -1.11
NEBP20929 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC8.13□□□□□ -1.11
NEBP20929 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NEBP20929 AC027702.1-201ENST00000563810 1770 ntBASIC8.13□□□□□ -1.11
NEBP20929 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
NEBP20929 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
NEBP20929 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC8.12□□□□□ -1.11
NEBP20929 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC8.12□□□□□ -1.11
NEBP20929 REXO1L10P-201ENST00000615707 1290 ntBASIC8.12□□□□□ -1.11
NEBP20929 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC8.12□□□□□ -1.11
NEBP20929 IGHV3-22-201ENST00000520721 359 ntBASIC8.12□□□□□ -1.11
NEBP20929 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC8.12□□□□□ -1.11
NEBP20929 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC8.12□□□□□ -1.11
NEBP20929 AL355355.2-201ENST00000442321 338 ntBASIC8.12□□□□□ -1.11
NEBP20929 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC8.12□□□□□ -1.11
NEBP20929 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 AK4P3-201ENST00000418260 669 ntBASIC8.12□□□□□ -1.11
NEBP20929 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC8.12□□□□□ -1.11
NEBP20929 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 KRT8P8-201ENST00000434750 1448 ntBASIC8.12□□□□□ -1.11
NEBP20929 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC8.12□□□□□ -1.11
NEBP20929 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC8.12□□□□□ -1.11
NEBP20929 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC8.12□□□□□ -1.11
NEBP20929 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NEBP20929 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
NEBP20929 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
NEBP20929 LIN28AP1-201ENST00000429574 405 ntBASIC8.11□□□□□ -1.11
NEBP20929 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC8.11□□□□□ -1.11
NEBP20929 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
NEBP20929 AC073195.1-201ENST00000607241 877 ntBASIC8.11□□□□□ -1.11
NEBP20929 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms