Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRKCAP17252 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRKCAP17252 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRKCAP17252 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.38■□□□□ 0.69
PRKCAP17252 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PRKCAP17252 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRKCAP17252 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.38■□□□□ 0.69
PRKCAP17252 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.38■□□□□ 0.69
PRKCAP17252 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PRKCAP17252 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.38■□□□□ 0.69
PRKCAP17252 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.38■□□□□ 0.69
PRKCAP17252 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.38■□□□□ 0.69
PRKCAP17252 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRKCAP17252 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRKCAP17252 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PRKCAP17252 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.37■□□□□ 0.69
PRKCAP17252 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRKCAP17252 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.37■□□□□ 0.69
PRKCAP17252 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PRKCAP17252 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.37■□□□□ 0.69
PRKCAP17252 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.37■□□□□ 0.69
PRKCAP17252 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRKCAP17252 AC055733.4-201ENST00000638462 1354 ntBASIC19.37■□□□□ 0.69
PRKCAP17252 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.37■□□□□ 0.69
PRKCAP17252 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRKCAP17252 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.37■□□□□ 0.69
PRKCAP17252 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRKCAP17252 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRKCAP17252 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.37■□□□□ 0.69
PRKCAP17252 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRKCAP17252 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PRKCAP17252 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.37■□□□□ 0.69
PRKCAP17252 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRKCAP17252 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRKCAP17252 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRKCAP17252 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRKCAP17252 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRKCAP17252 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PRKCAP17252 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.36■□□□□ 0.69
PRKCAP17252 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.36■□□□□ 0.69
PRKCAP17252 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.36■□□□□ 0.69
PRKCAP17252 AC010542.4-201ENST00000563151 1910 ntBASIC19.36■□□□□ 0.69
PRKCAP17252 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRKCAP17252 YBX1P1-201ENST00000445822 960 ntBASIC19.36■□□□□ 0.69
PRKCAP17252 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.36■□□□□ 0.69
PRKCAP17252 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.36■□□□□ 0.69
PRKCAP17252 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRKCAP17252 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.36■□□□□ 0.69
PRKCAP17252 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRKCAP17252 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.36■□□□□ 0.69
PRKCAP17252 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRKCAP17252 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRKCAP17252 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRKCAP17252 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PRKCAP17252 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PRKCAP17252 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRKCAP17252 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRKCAP17252 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
PRKCAP17252 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRKCAP17252 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PRKCAP17252 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRKCAP17252 AC123595.1-201ENST00000440769 1046 ntBASIC19.35■□□□□ 0.69
PRKCAP17252 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRKCAP17252 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PRKCAP17252 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PRKCAP17252 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRKCAP17252 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRKCAP17252 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRKCAP17252 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRKCAP17252 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRKCAP17252 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.35■□□□□ 0.69
PRKCAP17252 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRKCAP17252 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRKCAP17252 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PRKCAP17252 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRKCAP17252 AC003102.1-202ENST00000563394 1796 ntBASIC19.34■□□□□ 0.69
PRKCAP17252 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PRKCAP17252 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PRKCAP17252 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PRKCAP17252 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.34■□□□□ 0.69
PRKCAP17252 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRKCAP17252 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.34■□□□□ 0.69
PRKCAP17252 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.34■□□□□ 0.69
PRKCAP17252 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.34■□□□□ 0.69
PRKCAP17252 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRKCAP17252 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRKCAP17252 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRKCAP17252 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.34■□□□□ 0.69
PRKCAP17252 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.34■□□□□ 0.69
PRKCAP17252 LINC02228-203ENST00000641970 1355 ntBASIC19.33■□□□□ 0.69
PRKCAP17252 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRKCAP17252 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.33■□□□□ 0.69
PRKCAP17252 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.33■□□□□ 0.68
PRKCAP17252 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.33■□□□□ 0.68
PRKCAP17252 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
PRKCAP17252 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRKCAP17252 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.33■□□□□ 0.68
PRKCAP17252 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRKCAP17252 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRKCAP17252 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms