Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
UBCP0CG48 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.38■□□□□ 0.53
UBCP0CG48 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
UBCP0CG48 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.38■□□□□ 0.53
UBCP0CG48 BX842568.3-201ENST00000418104 571 ntBASIC18.38■□□□□ 0.53
UBCP0CG48 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.38■□□□□ 0.53
UBCP0CG48 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.38■□□□□ 0.53
UBCP0CG48 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.38■□□□□ 0.53
UBCP0CG48 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
UBCP0CG48 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
UBCP0CG48 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
UBCP0CG48 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBCP0CG48 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBCP0CG48 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.37■□□□□ 0.53
UBCP0CG48 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.37■□□□□ 0.53
UBCP0CG48 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBCP0CG48 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
UBCP0CG48 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBCP0CG48 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBCP0CG48 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.37■□□□□ 0.53
UBCP0CG48 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
UBCP0CG48 SMUG1P1-201ENST00000590640 811 ntBASIC18.37■□□□□ 0.53
UBCP0CG48 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBCP0CG48 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBCP0CG48 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBCP0CG48 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBCP0CG48 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.37■□□□□ 0.53
UBCP0CG48 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBCP0CG48 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBCP0CG48 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UBCP0CG48 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBCP0CG48 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
UBCP0CG48 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
UBCP0CG48 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
UBCP0CG48 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBCP0CG48 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBCP0CG48 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBCP0CG48 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBCP0CG48 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBCP0CG48 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBCP0CG48 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBCP0CG48 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBCP0CG48 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBCP0CG48 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UBCP0CG48 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
UBCP0CG48 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.36■□□□□ 0.53
UBCP0CG48 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.36■□□□□ 0.53
UBCP0CG48 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UBCP0CG48 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBCP0CG48 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBCP0CG48 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBCP0CG48 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.36■□□□□ 0.53
UBCP0CG48 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBCP0CG48 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
UBCP0CG48 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBCP0CG48 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBCP0CG48 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBCP0CG48 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBCP0CG48 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.35■□□□□ 0.53
UBCP0CG48 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBCP0CG48 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBCP0CG48 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.35■□□□□ 0.53
UBCP0CG48 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBCP0CG48 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBCP0CG48 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
UBCP0CG48 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.35■□□□□ 0.53
UBCP0CG48 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.35■□□□□ 0.53
UBCP0CG48 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.35■□□□□ 0.53
UBCP0CG48 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UBCP0CG48 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBCP0CG48 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UBCP0CG48 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBCP0CG48 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
UBCP0CG48 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBCP0CG48 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBCP0CG48 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBCP0CG48 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
UBCP0CG48 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.34■□□□□ 0.53
UBCP0CG48 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBCP0CG48 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBCP0CG48 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBCP0CG48 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBCP0CG48 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBCP0CG48 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms