Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHGBP05060 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
CHGBP05060 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.41■■□□□ 1.66
CHGBP05060 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.41■■□□□ 1.66
CHGBP05060 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHGBP05060 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.41■■□□□ 1.66
CHGBP05060 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHGBP05060 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC25.41■■□□□ 1.66
CHGBP05060 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.41■■□□□ 1.66
CHGBP05060 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHGBP05060 AC007375.3-201ENST00000600936 2314 ntBASIC25.41■■□□□ 1.66
CHGBP05060 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHGBP05060 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.4■■□□□ 1.66
CHGBP05060 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHGBP05060 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.4■■□□□ 1.66
CHGBP05060 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.4■■□□□ 1.66
CHGBP05060 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.4■■□□□ 1.66
CHGBP05060 AC016769.1-201ENST00000409132 1010 ntBASIC25.4■■□□□ 1.66
CHGBP05060 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.4■■□□□ 1.66
CHGBP05060 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.4■■□□□ 1.66
CHGBP05060 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.4■■□□□ 1.66
CHGBP05060 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHGBP05060 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
CHGBP05060 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHGBP05060 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.39■■□□□ 1.66
CHGBP05060 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.39■■□□□ 1.66
CHGBP05060 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CHGBP05060 AF106564.1-201ENST00000607058 2553 ntBASIC25.39■■□□□ 1.66
CHGBP05060 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHGBP05060 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
CHGBP05060 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHGBP05060 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHGBP05060 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHGBP05060 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CHGBP05060 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.39■■□□□ 1.66
CHGBP05060 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.39■■□□□ 1.66
CHGBP05060 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.39■■□□□ 1.65
CHGBP05060 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CHGBP05060 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.39■■□□□ 1.65
CHGBP05060 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.38■■□□□ 1.65
CHGBP05060 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHGBP05060 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.38■■□□□ 1.65
CHGBP05060 CDCA4P2-201ENST00000441182 718 ntBASIC25.38■■□□□ 1.65
CHGBP05060 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHGBP05060 RAP2CP1-201ENST00000605103 478 ntBASIC25.38■■□□□ 1.65
CHGBP05060 MYCNOS-205ENST00000641950 531 ntBASIC25.38■■□□□ 1.65
CHGBP05060 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.38■■□□□ 1.65
CHGBP05060 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHGBP05060 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.38■■□□□ 1.65
CHGBP05060 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.38■■□□□ 1.65
CHGBP05060 AC244015.2-201ENST00000616358 1861 ntBASIC25.38■■□□□ 1.65
CHGBP05060 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CHGBP05060 Z98882.1-201ENST00000622160 2253 ntBASIC25.38■■□□□ 1.65
CHGBP05060 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
CHGBP05060 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHGBP05060 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.37■■□□□ 1.65
CHGBP05060 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.37■■□□□ 1.65
CHGBP05060 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.37■■□□□ 1.65
CHGBP05060 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CHGBP05060 AC080038.1-201ENST00000611274 1154 ntBASIC25.37■■□□□ 1.65
CHGBP05060 RARRES2P11-201ENST00000635158 484 ntBASIC25.37■■□□□ 1.65
CHGBP05060 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.36■■□□□ 1.65
CHGBP05060 AC026310.3-201ENST00000625186 2373 ntBASIC25.36■■□□□ 1.65
CHGBP05060 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CHGBP05060 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.36■■□□□ 1.65
CHGBP05060 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.36■■□□□ 1.65
CHGBP05060 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHGBP05060 AC073111.5-205ENST00000641717 521 ntBASIC25.36■■□□□ 1.65
CHGBP05060 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHGBP05060 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
CHGBP05060 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHGBP05060 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CHGBP05060 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
CHGBP05060 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHGBP05060 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CHGBP05060 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHGBP05060 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHGBP05060 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHGBP05060 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHGBP05060 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
CHGBP05060 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CHGBP05060 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.35■■□□□ 1.65
CHGBP05060 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHGBP05060 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.35■■□□□ 1.65
CHGBP05060 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.34■■□□□ 1.65
CHGBP05060 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHGBP05060 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CHGBP05060 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHGBP05060 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.34■■□□□ 1.65
CHGBP05060 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHGBP05060 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.34■■□□□ 1.65
CHGBP05060 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CHGBP05060 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CHGBP05060 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHGBP05060 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CHGBP05060 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC25.33■■□□□ 1.65
CHGBP05060 AC090192.1-201ENST00000517740 490 ntBASIC25.33■■□□□ 1.65
CHGBP05060 DUX4L16-201ENST00000555130 1264 ntBASIC25.33■■□□□ 1.65
CHGBP05060 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHGBP05060 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms