Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 JHD2YJR119C 2187 nt4□□□□□ -1.77
CDC9P04819 FOX2YKR009C 2703 nt4□□□□□ -1.77
CDC9P04819 SRD1YCR018C 666 nt4□□□□□ -1.77
CDC9P04819 SPT2YER161C 1002 nt4□□□□□ -1.77
CDC9P04819 YGL039WYGL039W 1047 nt4□□□□□ -1.77
CDC9P04819 YGL152CYGL152C 678 nt4□□□□□ -1.77
CDC9P04819 YHR130CYHR130C 336 nt4□□□□□ -1.77
CDC9P04819 YIL165CYIL165C 360 nt4□□□□□ -1.77
CDC9P04819 COA3YJL062W-A 258 nt4□□□□□ -1.77
CDC9P04819 CSE4YKL049C 690 nt4□□□□□ -1.77
CDC9P04819 YKL063CYKL063C 504 nt4□□□□□ -1.77
CDC9P04819 YML031C-AYML031C-A 336 nt4□□□□□ -1.77
CDC9P04819 ARG80YMR042W 534 nt4□□□□□ -1.77
CDC9P04819 GCY1YOR120W 939 nt4□□□□□ -1.77
CDC9P04819 TPK2YPL203W 1143 nt4□□□□□ -1.77
CDC9P04819 YPR012WYPR012W 255 nt4□□□□□ -1.77
CDC9P04819 BRE5YNR051C 1548 nt4□□□□□ -1.77
CDC9P04819 SEC6YIL068C 2418 nt4□□□□□ -1.77
CDC9P04819 TRM11YOL124C 1302 nt3.99□□□□□ -1.77
CDC9P04819 SWC4YGR002C 1431 nt3.99□□□□□ -1.77
CDC9P04819 ARF1YDL192W 546 nt3.99□□□□□ -1.77
CDC9P04819 THI13YDL244W 1023 nt3.99□□□□□ -1.77
CDC9P04819 RPS4BYHR203C 786 nt3.99□□□□□ -1.77
CDC9P04819 AGE2YIL044C 897 nt3.99□□□□□ -1.77
CDC9P04819 ACF4YJR083C 930 nt3.99□□□□□ -1.77
CDC9P04819 VPS51YKR020W 495 nt3.99□□□□□ -1.77
CDC9P04819 YBL039W-BYBL039W-B 180 nt3.99□□□□□ -1.77
CDC9P04819 RPL16BYNL069C 597 nt3.99□□□□□ -1.77
CDC9P04819 YPR170W-AYPR170W-A 186 nt3.99□□□□□ -1.77
CDC9P04819 PMC1YGL006W 3522 nt3.99□□□□□ -1.77
CDC9P04819 PEP5YMR231W 3090 nt3.99□□□□□ -1.77
CDC9P04819 TOG1YER184C 2385 nt3.99□□□□□ -1.77
CDC9P04819 VAC7YNL054W 3498 nt3.99□□□□□ -1.77
CDC9P04819 APL4YPR029C 2499 nt3.99□□□□□ -1.77
CDC9P04819 RPG1YBR079C 2895 nt3.98□□□□□ -1.77
CDC9P04819 SHS1YDL225W 1656 nt3.98□□□□□ -1.77
CDC9P04819 YDR115WYDR115W 318 nt3.98□□□□□ -1.77
CDC9P04819 RSR1YGR152C 819 nt3.98□□□□□ -1.77
CDC9P04819 MTM1YGR257C 1101 nt3.98□□□□□ -1.77
CDC9P04819 YHL046W-AYHL046W-A 327 nt3.98□□□□□ -1.77
CDC9P04819 YHR213WYHR213W 597 nt3.98□□□□□ -1.77
CDC9P04819 POG1YIL122W 1056 nt3.98□□□□□ -1.77
CDC9P04819 YAR062WYAR062W 597 nt3.98□□□□□ -1.77
CDC9P04819 YHC1YLR298C 696 nt3.98□□□□□ -1.77
CDC9P04819 RPS16AYMR143W 432 nt3.98□□□□□ -1.77
CDC9P04819 YNL184CYNL184C 327 nt3.98□□□□□ -1.77
CDC9P04819 ATX1YNL259C 222 nt3.98□□□□□ -1.77
CDC9P04819 CBP3YPL215W 1008 nt3.98□□□□□ -1.77
CDC9P04819 YDR089WYDR089W 2610 nt3.98□□□□□ -1.77
CDC9P04819 TIF4631YGR162W 2859 nt3.98□□□□□ -1.77
CDC9P04819 ARG5,6YER069W 2592 nt3.98□□□□□ -1.77
CDC9P04819 IMD4YML056C 1575 nt3.97□□□□□ -1.77
CDC9P04819 SKO1YNL167C 1944 nt3.97□□□□□ -1.77
CDC9P04819 TMA64YDR117C 1698 nt3.97□□□□□ -1.77
CDC9P04819 YLR177WYLR177W 1887 nt3.97□□□□□ -1.77
CDC9P04819 GRX2YDR513W 432 nt3.97□□□□□ -1.77
CDC9P04819 YER084W-AYER084W-A 513 nt3.97□□□□□ -1.77
CDC9P04819 MIC19YFR011C 513 nt3.97□□□□□ -1.77
CDC9P04819 PRM8YGL053W 714 nt3.97□□□□□ -1.77
CDC9P04819 RPL9AYGL147C 576 nt3.97□□□□□ -1.77
CDC9P04819 YJR037WYJR037W 384 nt3.97□□□□□ -1.77
CDC9P04819 CNB1YKL190W 528 nt3.97□□□□□ -1.77
CDC9P04819 TDA8YAL064C-A 381 nt3.97□□□□□ -1.77
CDC9P04819 RNH203YLR154C 333 nt3.97□□□□□ -1.77
CDC9P04819 YLR154W-FYLR154W-F 141 nt3.97□□□□□ -1.77
CDC9P04819 POL4YCR014C 1749 nt3.97□□□□□ -1.77
CDC9P04819 VAC14YLR386W 2643 nt3.97□□□□□ -1.77
CDC9P04819 SRP68YPL243W 1800 nt3.97□□□□□ -1.77
CDC9P04819 SPO23YBR250W 1572 nt3.97□□□□□ -1.77
CDC9P04819 YBR259WYBR259W 2067 nt3.96□□□□□ -1.77
CDC9P04819 RIM13YMR154C 2184 nt3.96□□□□□ -1.78
CDC9P04819 HBT1YDL223C 3141 nt3.96□□□□□ -1.78
CDC9P04819 YDR157WYDR157W 402 nt3.96□□□□□ -1.78
CDC9P04819 PEX10YDR265W 1014 nt3.96□□□□□ -1.78
CDC9P04819 BUD13YGL174W 801 nt3.96□□□□□ -1.78
CDC9P04819 tS(AGA)D3tS(AGA)D3 83 nt3.96□□□□□ -1.78
CDC9P04819 UTP11YKL099C 753 nt3.96□□□□□ -1.78
CDC9P04819 YMR052C-AYMR052C-A 366 nt3.96□□□□□ -1.78
CDC9P04819 ASI2YNL159C 870 nt3.96□□□□□ -1.78
CDC9P04819 MPD2YOL088C 834 nt3.96□□□□□ -1.78
CDC9P04819 SCD6YPR129W 1050 nt3.96□□□□□ -1.78
CDC9P04819 STI1YOR027W 1770 nt3.96□□□□□ -1.78
CDC9P04819 GDS1YOR355W 1569 nt3.95□□□□□ -1.78
CDC9P04819 HNT1YDL125C 477 nt3.95□□□□□ -1.78
CDC9P04819 MIX14YDR031W 366 nt3.95□□□□□ -1.78
CDC9P04819 SUP56tL(CAA)A 82 nt3.95□□□□□ -1.78
CDC9P04819 SUP53tL(CAA)C 82 nt3.95□□□□□ -1.78
CDC9P04819 tL(CAA)DtL(CAA)D 82 nt3.95□□□□□ -1.78
CDC9P04819 tL(CAA)G1tL(CAA)G1 82 nt3.95□□□□□ -1.78
CDC9P04819 SUP54tL(CAA)G2 82 nt3.95□□□□□ -1.78
CDC9P04819 tL(CAA)G3tL(CAA)G3 82 nt3.95□□□□□ -1.78
CDC9P04819 tL(CAA)KtL(CAA)K 82 nt3.95□□□□□ -1.78
CDC9P04819 tL(CAA)LtL(CAA)L 82 nt3.95□□□□□ -1.78
CDC9P04819 tL(CAA)MtL(CAA)M 82 nt3.95□□□□□ -1.78
CDC9P04819 tL(CAA)NtL(CAA)N 82 nt3.95□□□□□ -1.78
CDC9P04819 RPL11BYGR085C 525 nt3.95□□□□□ -1.78
CDC9P04819 SOP4YJL192C 705 nt3.95□□□□□ -1.78
CDC9P04819 LTP1YPR073C 486 nt3.95□□□□□ -1.78
CDC9P04819 RPL11AYPR102C 525 nt3.95□□□□□ -1.78
CDC9P04819 KIN2YLR096W 3444 nt3.95□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 21.1 ms