Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-CO1P00395 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-CO1P00395 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-CO1P00395 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.54■■□□□ 1.04
MT-CO1P00395 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-CO1P00395 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-CO1P00395 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-CO1P00395 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-CO1P00395 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MT-CO1P00395 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.53■■□□□ 1.04
MT-CO1P00395 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MT-CO1P00395 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
MT-CO1P00395 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MT-CO1P00395 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.53■■□□□ 1.04
MT-CO1P00395 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.53■■□□□ 1.04
MT-CO1P00395 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MT-CO1P00395 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.53■■□□□ 1.04
MT-CO1P00395 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
MT-CO1P00395 KRT18P11-201ENST00000435214 1283 ntBASIC21.53■■□□□ 1.04
MT-CO1P00395 CDCA4P2-201ENST00000441182 718 ntBASIC21.53■■□□□ 1.04
MT-CO1P00395 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MT-CO1P00395 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.53■■□□□ 1.04
MT-CO1P00395 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.53■■□□□ 1.04
MT-CO1P00395 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MT-CO1P00395 SLC7A5P2-201ENST00000553010 536 ntBASIC21.53■■□□□ 1.04
MT-CO1P00395 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.53■■□□□ 1.04
MT-CO1P00395 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.53■■□□□ 1.04
MT-CO1P00395 MFSD11-216ENST00000590393 1141 ntBASIC21.53■■□□□ 1.04
MT-CO1P00395 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.53■■□□□ 1.04
MT-CO1P00395 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
MT-CO1P00395 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
MT-CO1P00395 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
MT-CO1P00395 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MT-CO1P00395 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
MT-CO1P00395 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MT-CO1P00395 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MT-CO1P00395 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.52■■□□□ 1.04
MT-CO1P00395 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.52■■□□□ 1.04
MT-CO1P00395 AC073111.5-205ENST00000641717 521 ntBASIC21.52■■□□□ 1.04
MT-CO1P00395 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.52■■□□□ 1.04
MT-CO1P00395 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
MT-CO1P00395 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MT-CO1P00395 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
MT-CO1P00395 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
MT-CO1P00395 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MT-CO1P00395 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.51■■□□□ 1.03
MT-CO1P00395 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.51■■□□□ 1.03
MT-CO1P00395 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MT-CO1P00395 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
MT-CO1P00395 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MT-CO1P00395 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.51■■□□□ 1.03
MT-CO1P00395 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.51■■□□□ 1.03
MT-CO1P00395 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MT-CO1P00395 RAP2CP1-201ENST00000605103 478 ntBASIC21.51■■□□□ 1.03
MT-CO1P00395 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
MT-CO1P00395 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MT-CO1P00395 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MT-CO1P00395 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.51■■□□□ 1.03
MT-CO1P00395 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
MT-CO1P00395 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
MT-CO1P00395 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MT-CO1P00395 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MT-CO1P00395 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.5■■□□□ 1.03
MT-CO1P00395 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MT-CO1P00395 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.5■■□□□ 1.03
MT-CO1P00395 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.5■■□□□ 1.03
MT-CO1P00395 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.5■■□□□ 1.03
MT-CO1P00395 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.5■■□□□ 1.03
MT-CO1P00395 MYCNOS-205ENST00000641950 531 ntBASIC21.5■■□□□ 1.03
MT-CO1P00395 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
MT-CO1P00395 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MT-CO1P00395 C11orf96-202ENST00000528572 1834 ntBASIC21.5■■□□□ 1.03
MT-CO1P00395 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.5■■□□□ 1.03
MT-CO1P00395 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MT-CO1P00395 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.5■■□□□ 1.03
MT-CO1P00395 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MT-CO1P00395 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MT-CO1P00395 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MT-CO1P00395 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
MT-CO1P00395 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.49■■□□□ 1.03
MT-CO1P00395 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MT-CO1P00395 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MT-CO1P00395 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MT-CO1P00395 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.49■■□□□ 1.03
MT-CO1P00395 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.49■■□□□ 1.03
MT-CO1P00395 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MT-CO1P00395 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.48■■□□□ 1.03
MT-CO1P00395 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
MT-CO1P00395 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MT-CO1P00395 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
MT-CO1P00395 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
MT-CO1P00395 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MT-CO1P00395 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
MT-CO1P00395 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
MT-CO1P00395 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MT-CO1P00395 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MT-CO1P00395 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.48■■□□□ 1.03
MT-CO1P00395 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
MT-CO1P00395 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.48■■□□□ 1.03
MT-CO1P00395 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms