Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ALDH1A1P00352 MCRIP2P1-201ENST00000394346 511 ntBASIC24.28■■□□□ 1.48
ALDH1A1P00352 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ALDH1A1P00352 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.28■■□□□ 1.48
ALDH1A1P00352 TK2-213ENST00000563369 882 ntTSL 5 BASIC24.28■■□□□ 1.48
ALDH1A1P00352 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.28■■□□□ 1.48
ALDH1A1P00352 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ALDH1A1P00352 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ALDH1A1P00352 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ALDH1A1P00352 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
ALDH1A1P00352 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.28■■□□□ 1.48
ALDH1A1P00352 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24.27■■□□□ 1.48
ALDH1A1P00352 POM121L13P-201ENST00000422362 380 ntBASIC24.27■■□□□ 1.48
ALDH1A1P00352 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC24.27■■□□□ 1.48
ALDH1A1P00352 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ALDH1A1P00352 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ALDH1A1P00352 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
ALDH1A1P00352 AC133561.5-201ENST00000635547 218 ntBASIC24.27■■□□□ 1.48
ALDH1A1P00352 AC061975.6-201ENST00000579045 1553 ntBASIC24.27■■□□□ 1.48
ALDH1A1P00352 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
ALDH1A1P00352 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ALDH1A1P00352 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ALDH1A1P00352 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.26■■□□□ 1.47
ALDH1A1P00352 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
ALDH1A1P00352 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
ALDH1A1P00352 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.26■■□□□ 1.47
ALDH1A1P00352 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.26■■□□□ 1.47
ALDH1A1P00352 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.26■■□□□ 1.47
ALDH1A1P00352 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC24.26■■□□□ 1.47
ALDH1A1P00352 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC24.26■■□□□ 1.47
ALDH1A1P00352 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC24.26■■□□□ 1.47
ALDH1A1P00352 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC24.26■■□□□ 1.47
ALDH1A1P00352 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC24.26■■□□□ 1.47
ALDH1A1P00352 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.26■■□□□ 1.47
ALDH1A1P00352 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ALDH1A1P00352 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
ALDH1A1P00352 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
ALDH1A1P00352 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ALDH1A1P00352 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ALDH1A1P00352 MFF-205ENST00000354503 1085 ntTSL 2 BASIC24.25■■□□□ 1.47
ALDH1A1P00352 AC091799.1-201ENST00000422823 811 ntBASIC24.25■■□□□ 1.47
ALDH1A1P00352 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC24.25■■□□□ 1.47
ALDH1A1P00352 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC24.25■■□□□ 1.47
ALDH1A1P00352 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ALDH1A1P00352 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ALDH1A1P00352 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ALDH1A1P00352 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.24■■□□□ 1.47
ALDH1A1P00352 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ALDH1A1P00352 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ALDH1A1P00352 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
ALDH1A1P00352 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.24■■□□□ 1.47
ALDH1A1P00352 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ALDH1A1P00352 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.24■■□□□ 1.47
ALDH1A1P00352 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.24■■□□□ 1.47
ALDH1A1P00352 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.24■■□□□ 1.47
ALDH1A1P00352 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
ALDH1A1P00352 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ALDH1A1P00352 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ALDH1A1P00352 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ALDH1A1P00352 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC24.24■■□□□ 1.47
ALDH1A1P00352 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.24■■□□□ 1.47
ALDH1A1P00352 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.24■■□□□ 1.47
ALDH1A1P00352 ABCB10P4-201ENST00000566803 2184 ntBASIC24.23■■□□□ 1.47
ALDH1A1P00352 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
ALDH1A1P00352 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
ALDH1A1P00352 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC24.23■■□□□ 1.47
ALDH1A1P00352 TSPY7P-201ENST00000431358 1114 ntBASIC24.23■■□□□ 1.47
ALDH1A1P00352 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC24.23■■□□□ 1.47
ALDH1A1P00352 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
ALDH1A1P00352 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC24.23■■□□□ 1.47
ALDH1A1P00352 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ALDH1A1P00352 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
ALDH1A1P00352 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
ALDH1A1P00352 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
ALDH1A1P00352 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ALDH1A1P00352 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ALDH1A1P00352 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
ALDH1A1P00352 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.22■■□□□ 1.47
ALDH1A1P00352 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
ALDH1A1P00352 AL135905.2-201ENST00000584934 1404 ntBASIC24.22■■□□□ 1.47
ALDH1A1P00352 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.22■■□□□ 1.47
ALDH1A1P00352 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC24.22■■□□□ 1.47
ALDH1A1P00352 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.22■■□□□ 1.47
ALDH1A1P00352 KRT18P68-201ENST00000392293 1000 ntBASIC24.22■■□□□ 1.47
ALDH1A1P00352 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ALDH1A1P00352 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.22■■□□□ 1.47
ALDH1A1P00352 DHDH-203ENST00000522614 776 ntTSL 5 BASIC24.22■■□□□ 1.47
ALDH1A1P00352 MIR4785-201ENST00000585005 73 ntBASIC24.22■■□□□ 1.47
ALDH1A1P00352 AC097493.4-201ENST00000641197 219 ntBASIC24.22■■□□□ 1.47
ALDH1A1P00352 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.22■■□□□ 1.47
ALDH1A1P00352 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
ALDH1A1P00352 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.21■■□□□ 1.47
ALDH1A1P00352 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ALDH1A1P00352 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
ALDH1A1P00352 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.21■■□□□ 1.47
ALDH1A1P00352 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
ALDH1A1P00352 AC087499.1-201ENST00000418141 1075 ntBASIC24.21■■□□□ 1.47
ALDH1A1P00352 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC24.21■■□□□ 1.47
ALDH1A1P00352 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC24.21■■□□□ 1.47
ALDH1A1P00352 AL049637.2-201ENST00000641778 930 ntBASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms