Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TTC4O95801 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TTC4O95801 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC4O95801 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TTC4O95801 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC4O95801 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TTC4O95801 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC4O95801 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TTC4O95801 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TTC4O95801 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
TTC4O95801 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC4O95801 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC4O95801 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
TTC4O95801 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
TTC4O95801 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TTC4O95801 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC4O95801 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TTC4O95801 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TTC4O95801 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC4O95801 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.53■■□□□ 1.04
TTC4O95801 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TTC4O95801 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TTC4O95801 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC4O95801 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
TTC4O95801 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TTC4O95801 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC4O95801 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
TTC4O95801 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC4O95801 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
TTC4O95801 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TTC4O95801 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TTC4O95801 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC4O95801 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TTC4O95801 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.52■■□□□ 1.04
TTC4O95801 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC4O95801 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TTC4O95801 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.52■■□□□ 1.04
TTC4O95801 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TTC4O95801 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TTC4O95801 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC4O95801 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC4O95801 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC4O95801 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TTC4O95801 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC4O95801 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.51■■□□□ 1.03
TTC4O95801 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.51■■□□□ 1.03
TTC4O95801 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TTC4O95801 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC4O95801 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC4O95801 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC4O95801 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.51■■□□□ 1.03
TTC4O95801 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC4O95801 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC4O95801 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TTC4O95801 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
TTC4O95801 AP004607.7-201ENST00000527152 1677 ntBASIC21.5■■□□□ 1.03
TTC4O95801 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC4O95801 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TTC4O95801 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.5■■□□□ 1.03
TTC4O95801 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC4O95801 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.5■■□□□ 1.03
TTC4O95801 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.5■■□□□ 1.03
TTC4O95801 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TTC4O95801 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.5■■□□□ 1.03
TTC4O95801 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.5■■□□□ 1.03
TTC4O95801 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TTC4O95801 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TTC4O95801 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC4O95801 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.49■■□□□ 1.03
TTC4O95801 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TTC4O95801 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.49■■□□□ 1.03
TTC4O95801 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TTC4O95801 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC4O95801 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TTC4O95801 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC4O95801 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.49■■□□□ 1.03
TTC4O95801 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TTC4O95801 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC4O95801 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC4O95801 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
TTC4O95801 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC4O95801 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.48■■□□□ 1.03
TTC4O95801 GABARAPL3-202ENST00000624044 1851 ntBASIC21.48■■□□□ 1.03
TTC4O95801 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC4O95801 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC4O95801 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC4O95801 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.48■■□□□ 1.03
TTC4O95801 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.48■■□□□ 1.03
TTC4O95801 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.48■■□□□ 1.03
TTC4O95801 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.48■■□□□ 1.03
TTC4O95801 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.48■■□□□ 1.03
TTC4O95801 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC4O95801 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC4O95801 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TTC4O95801 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC4O95801 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC4O95801 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TTC4O95801 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.48■■□□□ 1.03
TTC4O95801 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC4O95801 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms