Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC32.01■■■□□ 2.71
RAPGEF3O95398 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
RAPGEF3O95398 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RAPGEF3O95398 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RAPGEF3O95398 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC32■■■□□ 2.71
RAPGEF3O95398 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
RAPGEF3O95398 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RAPGEF3O95398 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RAPGEF3O95398 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
RAPGEF3O95398 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC32■■■□□ 2.71
RAPGEF3O95398 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
RAPGEF3O95398 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC32■■■□□ 2.71
RAPGEF3O95398 KLF2-202ENST00000592003 564 ntTSL 3 BASIC32■■■□□ 2.71
RAPGEF3O95398 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC32■■■□□ 2.71
RAPGEF3O95398 KRT17P2-201ENST00000300992 1314 ntBASIC32■■■□□ 2.71
RAPGEF3O95398 ISG20-202ENST00000379224 540 ntTSL 3 BASIC31.99■■■□□ 2.71
RAPGEF3O95398 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC31.99■■■□□ 2.71
RAPGEF3O95398 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
RAPGEF3O95398 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
RAPGEF3O95398 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
RAPGEF3O95398 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC31.99■■■□□ 2.71
RAPGEF3O95398 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
RAPGEF3O95398 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
RAPGEF3O95398 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC31.98■■■□□ 2.71
RAPGEF3O95398 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
RAPGEF3O95398 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
RAPGEF3O95398 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC31.98■■■□□ 2.71
RAPGEF3O95398 TK2-204ENST00000525974 1178 ntTSL 2 BASIC31.98■■■□□ 2.71
RAPGEF3O95398 PPOX-219ENST00000544598 813 ntTSL 2 BASIC31.98■■■□□ 2.71
RAPGEF3O95398 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
RAPGEF3O95398 AC100791.3-201ENST00000617619 330 ntBASIC31.98■■■□□ 2.71
RAPGEF3O95398 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
RAPGEF3O95398 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC31.97■■■□□ 2.71
RAPGEF3O95398 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
RAPGEF3O95398 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
RAPGEF3O95398 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
RAPGEF3O95398 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC31.97■■■□□ 2.71
RAPGEF3O95398 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC31.97■■■□□ 2.71
RAPGEF3O95398 OR2A1-AS1-207ENST00000486094 819 ntBASIC31.97■■■□□ 2.71
RAPGEF3O95398 FAM21FP-204ENST00000608637 956 ntBASIC31.97■■■□□ 2.71
RAPGEF3O95398 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
RAPGEF3O95398 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
RAPGEF3O95398 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC31.97■■■□□ 2.71
RAPGEF3O95398 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
RAPGEF3O95398 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RAPGEF3O95398 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RAPGEF3O95398 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC31.96■■■□□ 2.71
RAPGEF3O95398 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC31.96■■■□□ 2.71
RAPGEF3O95398 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.96■■■□□ 2.71
RAPGEF3O95398 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC31.96■■■□□ 2.71
RAPGEF3O95398 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
RAPGEF3O95398 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
RAPGEF3O95398 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
RAPGEF3O95398 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
RAPGEF3O95398 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC31.95■■■□□ 2.71
RAPGEF3O95398 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC31.95■■■□□ 2.7
RAPGEF3O95398 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
RAPGEF3O95398 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC31.94■■■□□ 2.7
RAPGEF3O95398 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
RAPGEF3O95398 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
RAPGEF3O95398 MFF-205ENST00000354503 1085 ntTSL 2 BASIC31.94■■■□□ 2.7
RAPGEF3O95398 AC091799.1-201ENST00000422823 811 ntBASIC31.94■■■□□ 2.7
RAPGEF3O95398 KRT18P35-201ENST00000510488 1269 ntBASIC31.94■■■□□ 2.7
RAPGEF3O95398 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
RAPGEF3O95398 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC31.94■■■□□ 2.7
RAPGEF3O95398 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC31.94■■■□□ 2.7
RAPGEF3O95398 AL049637.2-201ENST00000641778 930 ntBASIC31.94■■■□□ 2.7
RAPGEF3O95398 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
RAPGEF3O95398 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC31.94■■■□□ 2.7
RAPGEF3O95398 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC31.94■■■□□ 2.7
RAPGEF3O95398 RARG-204ENST00000543726 1779 ntTSL 2 BASIC31.94■■■□□ 2.7
RAPGEF3O95398 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
RAPGEF3O95398 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RAPGEF3O95398 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC31.93■■■□□ 2.7
RAPGEF3O95398 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC31.93■■■□□ 2.7
RAPGEF3O95398 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RAPGEF3O95398 POM121L13P-201ENST00000422362 380 ntBASIC31.93■■■□□ 2.7
RAPGEF3O95398 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
RAPGEF3O95398 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
RAPGEF3O95398 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC31.93■■■□□ 2.7
RAPGEF3O95398 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC31.93■■■□□ 2.7
RAPGEF3O95398 AL589743.5-201ENST00000616611 1050 ntBASIC31.93■■■□□ 2.7
RAPGEF3O95398 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
RAPGEF3O95398 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
RAPGEF3O95398 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
RAPGEF3O95398 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
RAPGEF3O95398 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC31.92■■■□□ 2.7
RAPGEF3O95398 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
RAPGEF3O95398 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
RAPGEF3O95398 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RAPGEF3O95398 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
RAPGEF3O95398 REXO2-208ENST00000539754 791 ntTSL 2 BASIC31.92■■■□□ 2.7
RAPGEF3O95398 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC31.92■■■□□ 2.7
RAPGEF3O95398 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC31.92■■■□□ 2.7
RAPGEF3O95398 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC31.92■■■□□ 2.7
RAPGEF3O95398 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RAPGEF3O95398 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
RAPGEF3O95398 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RAPGEF3O95398 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC31.91■■■□□ 2.7
RAPGEF3O95398 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC31.91■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms