Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ALX3O95076 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALX3O95076 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX3O95076 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
ALX3O95076 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX3O95076 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX3O95076 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ALX3O95076 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ALX3O95076 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX3O95076 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.49■□□□□ 0.55
ALX3O95076 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ALX3O95076 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ALX3O95076 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ALX3O95076 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX3O95076 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.49■□□□□ 0.55
ALX3O95076 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX3O95076 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX3O95076 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
ALX3O95076 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX3O95076 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX3O95076 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ALX3O95076 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX3O95076 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX3O95076 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ALX3O95076 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.48■□□□□ 0.55
ALX3O95076 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.48■□□□□ 0.55
ALX3O95076 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX3O95076 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX3O95076 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX3O95076 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ALX3O95076 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX3O95076 SRD5A1P1-201ENST00000442297 786 ntBASIC18.48■□□□□ 0.55
ALX3O95076 AC010141.3-201ENST00000456659 717 ntBASIC18.48■□□□□ 0.55
ALX3O95076 AC104564.3-201ENST00000582367 638 ntBASIC18.48■□□□□ 0.55
ALX3O95076 AL138724.1-201ENST00000606771 1088 ntBASIC18.48■□□□□ 0.55
ALX3O95076 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX3O95076 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ALX3O95076 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX3O95076 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX3O95076 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ALX3O95076 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX3O95076 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX3O95076 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.47■□□□□ 0.55
ALX3O95076 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.47■□□□□ 0.55
ALX3O95076 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.47■□□□□ 0.55
ALX3O95076 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ALX3O95076 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALX3O95076 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ALX3O95076 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.47■□□□□ 0.55
ALX3O95076 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ALX3O95076 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.47■□□□□ 0.55
ALX3O95076 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ALX3O95076 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ALX3O95076 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ALX3O95076 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.47■□□□□ 0.55
ALX3O95076 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALX3O95076 AL158211.5-201ENST00000623583 2518 ntBASIC18.47■□□□□ 0.55
ALX3O95076 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
ALX3O95076 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ALX3O95076 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
ALX3O95076 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ALX3O95076 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ALX3O95076 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.46■□□□□ 0.55
ALX3O95076 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ALX3O95076 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.46■□□□□ 0.55
ALX3O95076 Z98882.1-201ENST00000622160 2253 ntBASIC18.46■□□□□ 0.55
ALX3O95076 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.46■□□□□ 0.55
ALX3O95076 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.46■□□□□ 0.55
ALX3O95076 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ALX3O95076 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ALX3O95076 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
ALX3O95076 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ALX3O95076 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ALX3O95076 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
ALX3O95076 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ALX3O95076 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALX3O95076 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALX3O95076 OXCT2P1-201ENST00000447263 1535 ntBASIC18.45■□□□□ 0.54
ALX3O95076 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.45■□□□□ 0.54
ALX3O95076 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALX3O95076 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.45■□□□□ 0.54
ALX3O95076 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ALX3O95076 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.45■□□□□ 0.54
ALX3O95076 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALX3O95076 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.45■□□□□ 0.54
ALX3O95076 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALX3O95076 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ALX3O95076 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.45■□□□□ 0.54
ALX3O95076 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
ALX3O95076 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.45■□□□□ 0.54
ALX3O95076 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALX3O95076 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
ALX3O95076 LINC01006-201ENST00000333319 2292 ntBASIC18.44■□□□□ 0.54
ALX3O95076 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.44■□□□□ 0.54
ALX3O95076 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALX3O95076 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.44■□□□□ 0.54
ALX3O95076 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALX3O95076 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.44■□□□□ 0.54
ALX3O95076 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.44■□□□□ 0.54
ALX3O95076 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms