Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.61■■□□□ 1.05
RPP40O75818 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPP40O75818 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPP40O75818 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RPP40O75818 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.61■■□□□ 1.05
RPP40O75818 POU5F1P3-201ENST00000428824 1078 ntBASIC21.61■■□□□ 1.05
RPP40O75818 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.61■■□□□ 1.05
RPP40O75818 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.61■■□□□ 1.05
RPP40O75818 AC098934.4-201ENST00000564127 592 ntBASIC21.61■■□□□ 1.05
RPP40O75818 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.61■■□□□ 1.05
RPP40O75818 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPP40O75818 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPP40O75818 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPP40O75818 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPP40O75818 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
RPP40O75818 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.61■■□□□ 1.05
RPP40O75818 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPP40O75818 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.61■■□□□ 1.05
RPP40O75818 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.6■■□□□ 1.05
RPP40O75818 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.6■■□□□ 1.05
RPP40O75818 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
RPP40O75818 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RPP40O75818 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RPP40O75818 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RPP40O75818 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.6■■□□□ 1.05
RPP40O75818 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RPP40O75818 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.6■■□□□ 1.05
RPP40O75818 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.6■■□□□ 1.05
RPP40O75818 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP40O75818 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.6■■□□□ 1.05
RPP40O75818 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RPP40O75818 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPP40O75818 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPP40O75818 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.59■■□□□ 1.05
RPP40O75818 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.59■■□□□ 1.05
RPP40O75818 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPP40O75818 KRT18P29-201ENST00000397031 1267 ntBASIC21.59■■□□□ 1.05
RPP40O75818 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPP40O75818 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.59■■□□□ 1.05
RPP40O75818 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPP40O75818 MIR4758-201ENST00000577688 71 ntBASIC21.59■■□□□ 1.05
RPP40O75818 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.59■■□□□ 1.05
RPP40O75818 AC010536.3-201ENST00000620306 533 ntBASIC21.59■■□□□ 1.05
RPP40O75818 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.59■■□□□ 1.05
RPP40O75818 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPP40O75818 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPP40O75818 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPP40O75818 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPP40O75818 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPP40O75818 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.59■■□□□ 1.05
RPP40O75818 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPP40O75818 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPP40O75818 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPP40O75818 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPP40O75818 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPP40O75818 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPP40O75818 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.58■■□□□ 1.05
RPP40O75818 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.58■■□□□ 1.05
RPP40O75818 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPP40O75818 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPP40O75818 ITM2C-210ENST00000620962 501 ntBASIC21.58■■□□□ 1.05
RPP40O75818 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RPP40O75818 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPP40O75818 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.58■■□□□ 1.04
RPP40O75818 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RPP40O75818 FAM99A-202ENST00000538190 1989 ntBASIC21.57■■□□□ 1.04
RPP40O75818 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPP40O75818 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPP40O75818 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPP40O75818 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPP40O75818 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.57■■□□□ 1.04
RPP40O75818 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.57■■□□□ 1.04
RPP40O75818 RNA5SP413-201ENST00000516373 109 ntBASIC21.57■■□□□ 1.04
RPP40O75818 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RPP40O75818 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.57■■□□□ 1.04
RPP40O75818 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.57■■□□□ 1.04
RPP40O75818 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.57■■□□□ 1.04
RPP40O75818 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPP40O75818 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPP40O75818 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
RPP40O75818 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPP40O75818 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
RPP40O75818 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPP40O75818 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPP40O75818 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RPP40O75818 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms