Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AC006015.1-201ENST00000429970 570 ntBASIC21.41■■□□□ 1.02
PRAMEF11O60813 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.41■■□□□ 1.02
PRAMEF11O60813 UBE2DNL-204ENST00000602536 740 ntBASIC21.41■■□□□ 1.02
PRAMEF11O60813 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.41■■□□□ 1.02
PRAMEF11O60813 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.41■■□□□ 1.02
PRAMEF11O60813 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.4■■□□□ 1.02
PRAMEF11O60813 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRAMEF11O60813 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRAMEF11O60813 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRAMEF11O60813 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRAMEF11O60813 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRAMEF11O60813 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.4■■□□□ 1.02
PRAMEF11O60813 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.4■■□□□ 1.02
PRAMEF11O60813 AC120498.10-201ENST00000621827 505 ntBASIC21.4■■□□□ 1.02
PRAMEF11O60813 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PRAMEF11O60813 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.4■■□□□ 1.02
PRAMEF11O60813 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PRAMEF11O60813 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.4■■□□□ 1.02
PRAMEF11O60813 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRAMEF11O60813 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.39■■□□□ 1.02
PRAMEF11O60813 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
PRAMEF11O60813 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
PRAMEF11O60813 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PRAMEF11O60813 KRT16P2-201ENST00000414673 1423 ntBASIC21.39■■□□□ 1.02
PRAMEF11O60813 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRAMEF11O60813 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRAMEF11O60813 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRAMEF11O60813 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.39■■□□□ 1.01
PRAMEF11O60813 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRAMEF11O60813 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRAMEF11O60813 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.39■■□□□ 1.01
PRAMEF11O60813 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.39■■□□□ 1.01
PRAMEF11O60813 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PRAMEF11O60813 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRAMEF11O60813 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
PRAMEF11O60813 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PRAMEF11O60813 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PRAMEF11O60813 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF11O60813 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.38■■□□□ 1.01
PRAMEF11O60813 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.38■■□□□ 1.01
PRAMEF11O60813 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PRAMEF11O60813 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF11O60813 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF11O60813 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PRAMEF11O60813 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF11O60813 AC016769.1-201ENST00000409132 1010 ntBASIC21.38■■□□□ 1.01
PRAMEF11O60813 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF11O60813 KRT18P11-201ENST00000435214 1283 ntBASIC21.38■■□□□ 1.01
PRAMEF11O60813 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF11O60813 SLC7A5P1-201ENST00000568957 537 ntBASIC21.38■■□□□ 1.01
PRAMEF11O60813 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF11O60813 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.38■■□□□ 1.01
PRAMEF11O60813 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.38■■□□□ 1.01
PRAMEF11O60813 IKBKGP1-201ENST00000612193 1073 ntBASIC21.38■■□□□ 1.01
PRAMEF11O60813 AC092437.1-201ENST00000624794 1048 ntBASIC21.38■■□□□ 1.01
PRAMEF11O60813 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF11O60813 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF11O60813 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF11O60813 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF11O60813 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF11O60813 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF11O60813 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF11O60813 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF11O60813 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF11O60813 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF11O60813 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF11O60813 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF11O60813 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.37■■□□□ 1.01
PRAMEF11O60813 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.37■■□□□ 1.01
PRAMEF11O60813 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PRAMEF11O60813 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.37■■□□□ 1.01
PRAMEF11O60813 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.37■■□□□ 1.01
PRAMEF11O60813 MYCNOS-205ENST00000641950 531 ntBASIC21.37■■□□□ 1.01
PRAMEF11O60813 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF11O60813 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF11O60813 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF11O60813 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF11O60813 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.36■■□□□ 1.01
PRAMEF11O60813 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PRAMEF11O60813 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF11O60813 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PRAMEF11O60813 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF11O60813 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PRAMEF11O60813 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF11O60813 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PRAMEF11O60813 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF11O60813 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF11O60813 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.36■■□□□ 1.01
PRAMEF11O60813 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.36■■□□□ 1.01
PRAMEF11O60813 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.36■■□□□ 1.01
PRAMEF11O60813 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF11O60813 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.36■■□□□ 1.01
PRAMEF11O60813 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.36■■□□□ 1.01
PRAMEF11O60813 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF11O60813 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF11O60813 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRAMEF11O60813 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.35■■□□□ 1.01
PRAMEF11O60813 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRAMEF11O60813 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRAMEF11O60813 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms