Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CTNND1O60716 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC24.69■■□□□ 1.54
CTNND1O60716 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.69■■□□□ 1.54
CTNND1O60716 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC24.69■■□□□ 1.54
CTNND1O60716 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CTNND1O60716 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.69■■□□□ 1.54
CTNND1O60716 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CTNND1O60716 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTNND1O60716 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTNND1O60716 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.68■■□□□ 1.54
CTNND1O60716 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CTNND1O60716 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTNND1O60716 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CTNND1O60716 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CTNND1O60716 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CTNND1O60716 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CTNND1O60716 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
CTNND1O60716 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.67■■□□□ 1.54
CTNND1O60716 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CTNND1O60716 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC24.67■■□□□ 1.54
CTNND1O60716 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.67■■□□□ 1.54
CTNND1O60716 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CTNND1O60716 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.67■■□□□ 1.54
CTNND1O60716 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.67■■□□□ 1.54
CTNND1O60716 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CTNND1O60716 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CTNND1O60716 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CTNND1O60716 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
CTNND1O60716 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CTNND1O60716 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
CTNND1O60716 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
CTNND1O60716 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
CTNND1O60716 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.66■■□□□ 1.54
CTNND1O60716 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC24.66■■□□□ 1.54
CTNND1O60716 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
CTNND1O60716 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC24.66■■□□□ 1.54
CTNND1O60716 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.66■■□□□ 1.54
CTNND1O60716 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.66■■□□□ 1.54
CTNND1O60716 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CTNND1O60716 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.65■■□□□ 1.54
CTNND1O60716 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.65■■□□□ 1.54
CTNND1O60716 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.65■■□□□ 1.54
CTNND1O60716 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTNND1O60716 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTNND1O60716 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.65■■□□□ 1.54
CTNND1O60716 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTNND1O60716 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTNND1O60716 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTNND1O60716 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CTNND1O60716 AC091799.1-201ENST00000422823 811 ntBASIC24.65■■□□□ 1.54
CTNND1O60716 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC24.65■■□□□ 1.54
CTNND1O60716 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.65■■□□□ 1.54
CTNND1O60716 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24.65■■□□□ 1.54
CTNND1O60716 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.65■■□□□ 1.54
CTNND1O60716 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.65■■□□□ 1.54
CTNND1O60716 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.65■■□□□ 1.54
CTNND1O60716 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTNND1O60716 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC24.65■■□□□ 1.54
CTNND1O60716 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CTNND1O60716 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.65■■□□□ 1.54
CTNND1O60716 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.65■■□□□ 1.54
CTNND1O60716 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CTNND1O60716 INO80E-214ENST00000620599 515 ntTSL 2 BASIC24.65■■□□□ 1.54
CTNND1O60716 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.65■■□□□ 1.54
CTNND1O60716 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTNND1O60716 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.64■■□□□ 1.54
CTNND1O60716 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
CTNND1O60716 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
CTNND1O60716 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CTNND1O60716 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CTNND1O60716 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.64■■□□□ 1.54
CTNND1O60716 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CTNND1O60716 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.64■■□□□ 1.54
CTNND1O60716 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.64■■□□□ 1.54
CTNND1O60716 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
CTNND1O60716 LSM12P1-201ENST00000411836 588 ntBASIC24.64■■□□□ 1.54
CTNND1O60716 AC098590.1-201ENST00000468126 897 ntBASIC24.64■■□□□ 1.54
CTNND1O60716 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.64■■□□□ 1.54
CTNND1O60716 MMAB-206ENST00000540016 945 ntTSL 3 BASIC24.64■■□□□ 1.54
CTNND1O60716 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
CTNND1O60716 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.64■■□□□ 1.54
CTNND1O60716 FAM21FP-204ENST00000608637 956 ntBASIC24.64■■□□□ 1.54
CTNND1O60716 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
CTNND1O60716 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CTNND1O60716 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CTNND1O60716 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.63■■□□□ 1.53
CTNND1O60716 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.63■■□□□ 1.53
CTNND1O60716 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CTNND1O60716 RPS2P52-201ENST00000469610 820 ntBASIC24.63■■□□□ 1.53
CTNND1O60716 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CTNND1O60716 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CTNND1O60716 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.63■■□□□ 1.53
CTNND1O60716 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC24.63■■□□□ 1.53
CTNND1O60716 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
CTNND1O60716 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CTNND1O60716 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CTNND1O60716 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CTNND1O60716 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CTNND1O60716 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.62■■□□□ 1.53
CTNND1O60716 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms