Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.77■□□□□ 0.92
KLHL41O60662 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHL41O60662 AC079089.2-201ENST00000531211 1277 ntBASIC20.77■□□□□ 0.92
KLHL41O60662 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KLHL41O60662 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.77■□□□□ 0.92
KLHL41O60662 LINC01006-201ENST00000333319 2292 ntBASIC20.77■□□□□ 0.92
KLHL41O60662 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.77■□□□□ 0.92
KLHL41O60662 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
KLHL41O60662 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.77■□□□□ 0.91
KLHL41O60662 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL41O60662 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL41O60662 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL41O60662 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL41O60662 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KLHL41O60662 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
KLHL41O60662 AC034268.1-201ENST00000441047 882 ntBASIC20.76■□□□□ 0.91
KLHL41O60662 AL162430.1-201ENST00000480705 870 ntBASIC20.76■□□□□ 0.91
KLHL41O60662 AC087623.3-201ENST00000607047 1098 ntBASIC20.76■□□□□ 0.91
KLHL41O60662 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.76■□□□□ 0.91
KLHL41O60662 AL031602.1-201ENST00000633169 911 ntBASIC20.76■□□□□ 0.91
KLHL41O60662 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL41O60662 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL41O60662 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL41O60662 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL41O60662 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.75■□□□□ 0.91
KLHL41O60662 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL41O60662 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL41O60662 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL41O60662 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL41O60662 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
KLHL41O60662 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.75■□□□□ 0.91
KLHL41O60662 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.75■□□□□ 0.91
KLHL41O60662 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.75■□□□□ 0.91
KLHL41O60662 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.75■□□□□ 0.91
KLHL41O60662 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.75■□□□□ 0.91
KLHL41O60662 AL358852.1-201ENST00000623174 1268 ntBASIC20.75■□□□□ 0.91
KLHL41O60662 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL41O60662 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL41O60662 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL41O60662 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.75■□□□□ 0.91
KLHL41O60662 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.75■□□□□ 0.91
KLHL41O60662 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.75■□□□□ 0.91
KLHL41O60662 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL41O60662 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL41O60662 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.75■□□□□ 0.91
KLHL41O60662 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
KLHL41O60662 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.75■□□□□ 0.91
KLHL41O60662 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.74■□□□□ 0.91
KLHL41O60662 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLHL41O60662 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.74■□□□□ 0.91
KLHL41O60662 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.74■□□□□ 0.91
KLHL41O60662 OR7E47P-201ENST00000546390 1422 ntBASIC20.74■□□□□ 0.91
KLHL41O60662 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLHL41O60662 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLHL41O60662 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
KLHL41O60662 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLHL41O60662 AC092667.1-201ENST00000434301 2586 ntBASIC20.74■□□□□ 0.91
KLHL41O60662 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KLHL41O60662 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.73■□□□□ 0.91
KLHL41O60662 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL41O60662 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
KLHL41O60662 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.73■□□□□ 0.91
KLHL41O60662 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL41O60662 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL41O60662 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KLHL41O60662 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.73■□□□□ 0.91
KLHL41O60662 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL41O60662 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
KLHL41O60662 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.73■□□□□ 0.91
KLHL41O60662 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL41O60662 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.73■□□□□ 0.91
KLHL41O60662 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KLHL41O60662 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
KLHL41O60662 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL41O60662 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL41O60662 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL41O60662 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.72■□□□□ 0.91
KLHL41O60662 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHL41O60662 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
KLHL41O60662 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
KLHL41O60662 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHL41O60662 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHL41O60662 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.72■□□□□ 0.91
KLHL41O60662 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.72■□□□□ 0.91
KLHL41O60662 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
KLHL41O60662 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.72■□□□□ 0.91
KLHL41O60662 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.72■□□□□ 0.91
KLHL41O60662 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHL41O60662 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KLHL41O60662 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KLHL41O60662 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KLHL41O60662 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KLHL41O60662 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
KLHL41O60662 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
KLHL41O60662 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KLHL41O60662 YBX1P1-201ENST00000445822 960 ntBASIC20.71■□□□□ 0.91
KLHL41O60662 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
KLHL41O60662 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
KLHL41O60662 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KLHL41O60662 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms