Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 AC097381.1-201ENST00000429019 1296 ntBASIC18.74■□□□□ 0.59
TRAF3IP2O43734 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 AL137060.1-201ENST00000618151 2648 ntBASIC18.74■□□□□ 0.59
TRAF3IP2O43734 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 DUX4L2-201ENST00000561772 1275 ntBASIC18.73■□□□□ 0.59
TRAF3IP2O43734 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 DUX4L6-201ENST00000626483 1275 ntBASIC18.73■□□□□ 0.59
TRAF3IP2O43734 DUX4L1-201ENST00000627662 1275 ntBASIC18.73■□□□□ 0.59
TRAF3IP2O43734 DUX4L8-201ENST00000629013 1275 ntBASIC18.73■□□□□ 0.59
TRAF3IP2O43734 DUX4L3-201ENST00000630187 1275 ntBASIC18.73■□□□□ 0.59
TRAF3IP2O43734 DUX4L7-201ENST00000630678 1275 ntBASIC18.73■□□□□ 0.59
TRAF3IP2O43734 DUX4L5-201ENST00000630834 1275 ntBASIC18.73■□□□□ 0.59
TRAF3IP2O43734 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP2O43734 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 AF106564.1-201ENST00000607058 2553 ntBASIC18.72■□□□□ 0.59
TRAF3IP2O43734 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 AC138907.5-202ENST00000569484 235 ntBASIC18.72■□□□□ 0.59
TRAF3IP2O43734 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 MIR6821-201ENST00000617625 74 ntBASIC18.72■□□□□ 0.59
TRAF3IP2O43734 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAF3IP2O43734 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP2O43734 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP2O43734 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP2O43734 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAF3IP2O43734 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAF3IP2O43734 MIR935-201ENST00000401179 91 ntBASIC18.71■□□□□ 0.59
TRAF3IP2O43734 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAF3IP2O43734 AC104187.1-201ENST00000607510 612 ntBASIC18.71■□□□□ 0.59
TRAF3IP2O43734 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP2O43734 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP2O43734 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TRAF3IP2O43734 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP2O43734 AC005229.4-201ENST00000610085 2198 ntBASIC18.71■□□□□ 0.59
TRAF3IP2O43734 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRAF3IP2O43734 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 AC010141.2-201ENST00000452426 721 ntBASIC18.7■□□□□ 0.58
TRAF3IP2O43734 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 KRT18P61-201ENST00000585825 1298 ntBASIC18.7■□□□□ 0.58
TRAF3IP2O43734 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 AC087623.3-201ENST00000607047 1098 ntBASIC18.7■□□□□ 0.58
TRAF3IP2O43734 AC004854.2-201ENST00000608450 1441 ntBASIC18.7■□□□□ 0.58
TRAF3IP2O43734 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms