Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SNAI2O43623 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.64■□□□□ 0.09
SNAI2O43623 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.64■□□□□ 0.09
SNAI2O43623 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.64■□□□□ 0.09
SNAI2O43623 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SNAI2O43623 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNAI2O43623 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNAI2O43623 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
SNAI2O43623 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SNAI2O43623 AL033527.3-201ENST00000566366 1196 ntBASIC15.63■□□□□ 0.09
SNAI2O43623 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNAI2O43623 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNAI2O43623 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNAI2O43623 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.63■□□□□ 0.09
SNAI2O43623 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SNAI2O43623 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SNAI2O43623 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SNAI2O43623 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNAI2O43623 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
SNAI2O43623 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNAI2O43623 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNAI2O43623 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
SNAI2O43623 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SNAI2O43623 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNAI2O43623 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNAI2O43623 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
SNAI2O43623 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNAI2O43623 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SNAI2O43623 HES6-204ENST00000409182 863 ntTSL 2 BASIC15.62■□□□□ 0.09
SNAI2O43623 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.62■□□□□ 0.09
SNAI2O43623 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SNAI2O43623 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.62■□□□□ 0.09
SNAI2O43623 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.62■□□□□ 0.09
SNAI2O43623 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNAI2O43623 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.62■□□□□ 0.09
SNAI2O43623 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.62■□□□□ 0.09
SNAI2O43623 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SNAI2O43623 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SNAI2O43623 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SNAI2O43623 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNAI2O43623 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.61■□□□□ 0.09
SNAI2O43623 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.61■□□□□ 0.09
SNAI2O43623 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.61■□□□□ 0.09
SNAI2O43623 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.61■□□□□ 0.09
SNAI2O43623 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.61■□□□□ 0.09
SNAI2O43623 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SNAI2O43623 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNAI2O43623 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SNAI2O43623 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.6■□□□□ 0.09
SNAI2O43623 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.6■□□□□ 0.09
SNAI2O43623 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SNAI2O43623 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SNAI2O43623 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.6■□□□□ 0.09
SNAI2O43623 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.6■□□□□ 0.09
SNAI2O43623 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 AC068587.7-201ENST00000641602 218 ntBASIC15.6■□□□□ 0.09
SNAI2O43623 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.6■□□□□ 0.09
SNAI2O43623 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SNAI2O43623 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.6■□□□□ 0.09
SNAI2O43623 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNAI2O43623 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SNAI2O43623 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.6■□□□□ 0.09
SNAI2O43623 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SNAI2O43623 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms