Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.51■□□□□ 0.71
NKX2-8O15522 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-8O15522 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NKX2-8O15522 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-8O15522 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-8O15522 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.51■□□□□ 0.71
NKX2-8O15522 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NKX2-8O15522 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-8O15522 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-8O15522 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-8O15522 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NKX2-8O15522 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-8O15522 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-8O15522 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-8O15522 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NKX2-8O15522 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-8O15522 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NKX2-8O15522 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.5■□□□□ 0.71
NKX2-8O15522 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.5■□□□□ 0.71
NKX2-8O15522 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.5■□□□□ 0.71
NKX2-8O15522 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.5■□□□□ 0.71
NKX2-8O15522 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NKX2-8O15522 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-8O15522 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.5■□□□□ 0.71
NKX2-8O15522 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.5■□□□□ 0.71
NKX2-8O15522 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-8O15522 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-8O15522 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-8O15522 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-8O15522 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX2-8O15522 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.49■□□□□ 0.71
NKX2-8O15522 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-8O15522 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX2-8O15522 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.49■□□□□ 0.71
NKX2-8O15522 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-8O15522 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.49■□□□□ 0.71
NKX2-8O15522 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NKX2-8O15522 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.48■□□□□ 0.71
NKX2-8O15522 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
NKX2-8O15522 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NKX2-8O15522 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NKX2-8O15522 AC091799.1-201ENST00000422823 811 ntBASIC19.48■□□□□ 0.71
NKX2-8O15522 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.48■□□□□ 0.71
NKX2-8O15522 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.48■□□□□ 0.71
NKX2-8O15522 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.48■□□□□ 0.71
NKX2-8O15522 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NKX2-8O15522 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-8O15522 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NKX2-8O15522 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.47■□□□□ 0.71
NKX2-8O15522 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.47■□□□□ 0.71
NKX2-8O15522 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-8O15522 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NKX2-8O15522 AC008550.1-201ENST00000511500 884 ntBASIC19.47■□□□□ 0.71
NKX2-8O15522 AC008403.3-201ENST00000598924 454 ntBASIC19.47■□□□□ 0.71
NKX2-8O15522 CYP2T3P-201ENST00000601990 817 ntBASIC19.47■□□□□ 0.71
NKX2-8O15522 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.47■□□□□ 0.71
NKX2-8O15522 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-8O15522 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.47■□□□□ 0.71
NKX2-8O15522 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-8O15522 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-8O15522 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
NKX2-8O15522 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.46■□□□□ 0.71
NKX2-8O15522 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.46■□□□□ 0.71
NKX2-8O15522 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NKX2-8O15522 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-8O15522 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.46■□□□□ 0.71
NKX2-8O15522 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-8O15522 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.46■□□□□ 0.71
NKX2-8O15522 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NKX2-8O15522 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-8O15522 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.46■□□□□ 0.71
NKX2-8O15522 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.46■□□□□ 0.71
NKX2-8O15522 FAM21FP-204ENST00000608637 956 ntBASIC19.46■□□□□ 0.71
NKX2-8O15522 AL359736.2-201ENST00000621992 437 ntBASIC19.46■□□□□ 0.71
NKX2-8O15522 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-8O15522 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-8O15522 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.46■□□□□ 0.71
NKX2-8O15522 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
NKX2-8O15522 AC093323.1-202ENST00000635031 2045 ntBASIC19.46■□□□□ 0.71
NKX2-8O15522 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.46■□□□□ 0.71
NKX2-8O15522 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
NKX2-8O15522 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-8O15522 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
NKX2-8O15522 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.45■□□□□ 0.7
NKX2-8O15522 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.45■□□□□ 0.7
NKX2-8O15522 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-8O15522 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms