Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPEO14579 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPEO14579 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COPEO14579 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COPEO14579 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPEO14579 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.98■□□□□ 0.95
COPEO14579 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPEO14579 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.98■□□□□ 0.95
COPEO14579 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.98■□□□□ 0.95
COPEO14579 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
COPEO14579 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPEO14579 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPEO14579 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPEO14579 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPEO14579 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPEO14579 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPEO14579 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COPEO14579 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COPEO14579 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPEO14579 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.98■□□□□ 0.95
COPEO14579 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COPEO14579 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPEO14579 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
COPEO14579 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.97■□□□□ 0.95
COPEO14579 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPEO14579 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPEO14579 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.97■□□□□ 0.95
COPEO14579 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPEO14579 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPEO14579 GABARAPL3-202ENST00000624044 1851 ntBASIC20.97■□□□□ 0.95
COPEO14579 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
COPEO14579 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPEO14579 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COPEO14579 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPEO14579 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
COPEO14579 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COPEO14579 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COPEO14579 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPEO14579 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COPEO14579 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.97■□□□□ 0.95
COPEO14579 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.97■□□□□ 0.95
COPEO14579 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
COPEO14579 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPEO14579 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.96■□□□□ 0.95
COPEO14579 AP006587.3-201ENST00000525742 1516 ntBASIC20.96■□□□□ 0.95
COPEO14579 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COPEO14579 MIR3621-201ENST00000580529 85 ntBASIC20.96■□□□□ 0.95
COPEO14579 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.96■□□□□ 0.95
COPEO14579 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.96■□□□□ 0.95
COPEO14579 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.96■□□□□ 0.95
COPEO14579 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPEO14579 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPEO14579 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPEO14579 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPEO14579 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
COPEO14579 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COPEO14579 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPEO14579 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COPEO14579 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
COPEO14579 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COPEO14579 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPEO14579 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COPEO14579 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPEO14579 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COPEO14579 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
COPEO14579 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COPEO14579 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.95■□□□□ 0.94
COPEO14579 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.95■□□□□ 0.94
COPEO14579 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPEO14579 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.95■□□□□ 0.94
COPEO14579 AP005212.1-201ENST00000581547 1997 ntBASIC20.95■□□□□ 0.94
COPEO14579 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPEO14579 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPEO14579 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COPEO14579 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPEO14579 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPEO14579 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.94■□□□□ 0.94
COPEO14579 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPEO14579 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPEO14579 PLK5-205ENST00000642079 1969 ntBASIC20.94■□□□□ 0.94
COPEO14579 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPEO14579 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COPEO14579 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COPEO14579 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPEO14579 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.94■□□□□ 0.94
COPEO14579 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.94■□□□□ 0.94
COPEO14579 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.94■□□□□ 0.94
COPEO14579 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COPEO14579 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COPEO14579 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COPEO14579 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.93■□□□□ 0.94
COPEO14579 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.93■□□□□ 0.94
COPEO14579 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COPEO14579 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.93■□□□□ 0.94
COPEO14579 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.93■□□□□ 0.94
COPEO14579 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.93■□□□□ 0.94
COPEO14579 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.93■□□□□ 0.94
COPEO14579 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COPEO14579 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
COPEO14579 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms