Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 GABARAPL3-202ENST00000624044 1851 ntBASIC19.41■□□□□ 0.7
TNFRSF11BO00300 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 SRD5A1P1-201ENST00000442297 786 ntBASIC19.4■□□□□ 0.7
TNFRSF11BO00300 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF11BO00300 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.39■□□□□ 0.7
TNFRSF11BO00300 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TNFRSF11BO00300 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TNFRSF11BO00300 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TNFRSF11BO00300 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TNFRSF11BO00300 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.7
TNFRSF11BO00300 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFRSF11BO00300 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF11BO00300 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TNFRSF11BO00300 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TNFRSF11BO00300 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.39■□□□□ 0.69
TNFRSF11BO00300 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFRSF11BO00300 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF11BO00300 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TNFRSF11BO00300 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.39■□□□□ 0.69
TNFRSF11BO00300 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF11BO00300 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF11BO00300 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF11BO00300 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF11BO00300 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF11BO00300 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TNFRSF11BO00300 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF11BO00300 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF11BO00300 AP006587.3-201ENST00000525742 1516 ntBASIC19.38■□□□□ 0.69
TNFRSF11BO00300 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF11BO00300 AP005212.1-201ENST00000581547 1997 ntBASIC19.38■□□□□ 0.69
TNFRSF11BO00300 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF11BO00300 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF11BO00300 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 PLK5-205ENST00000642079 1969 ntBASIC19.37■□□□□ 0.69
TNFRSF11BO00300 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 MIR3621-201ENST00000580529 85 ntBASIC19.37■□□□□ 0.69
TNFRSF11BO00300 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.37■□□□□ 0.69
TNFRSF11BO00300 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFRSF11BO00300 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 AC073314.1-201ENST00000568729 2216 ntBASIC19.36■□□□□ 0.69
TNFRSF11BO00300 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms