Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.5■□□□□ 0.87
TAF4O00268 DUSP8P3-201ENST00000399571 1760 ntBASIC20.49■□□□□ 0.87
TAF4O00268 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TAF4O00268 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TAF4O00268 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.49■□□□□ 0.87
TAF4O00268 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.49■□□□□ 0.87
TAF4O00268 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.49■□□□□ 0.87
TAF4O00268 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TAF4O00268 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
TAF4O00268 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TAF4O00268 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.49■□□□□ 0.87
TAF4O00268 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.49■□□□□ 0.87
TAF4O00268 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
TAF4O00268 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TAF4O00268 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TAF4O00268 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.49■□□□□ 0.87
TAF4O00268 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.49■□□□□ 0.87
TAF4O00268 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.49■□□□□ 0.87
TAF4O00268 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TAF4O00268 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TAF4O00268 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TAF4O00268 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TAF4O00268 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.49■□□□□ 0.87
TAF4O00268 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TAF4O00268 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.49■□□□□ 0.87
TAF4O00268 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TAF4O00268 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TAF4O00268 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TAF4O00268 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TAF4O00268 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.48■□□□□ 0.87
TAF4O00268 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TAF4O00268 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TAF4O00268 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TAF4O00268 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TAF4O00268 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TAF4O00268 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.48■□□□□ 0.87
TAF4O00268 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
TAF4O00268 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.48■□□□□ 0.87
TAF4O00268 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TAF4O00268 AC010536.3-201ENST00000620306 533 ntBASIC20.48■□□□□ 0.87
TAF4O00268 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.48■□□□□ 0.87
TAF4O00268 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
TAF4O00268 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TAF4O00268 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TAF4O00268 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TAF4O00268 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TAF4O00268 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TAF4O00268 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TAF4O00268 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TAF4O00268 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.47■□□□□ 0.87
TAF4O00268 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
TAF4O00268 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TAF4O00268 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TAF4O00268 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.47■□□□□ 0.87
TAF4O00268 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TAF4O00268 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TAF4O00268 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TAF4O00268 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TAF4O00268 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.47■□□□□ 0.87
TAF4O00268 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
TAF4O00268 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TAF4O00268 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TAF4O00268 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TAF4O00268 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TAF4O00268 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TAF4O00268 AC144652.1-201ENST00000609974 1624 ntBASIC20.46■□□□□ 0.87
TAF4O00268 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
TAF4O00268 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TAF4O00268 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.46■□□□□ 0.87
TAF4O00268 AC211429.1-201ENST00000415277 523 ntBASIC20.46■□□□□ 0.87
TAF4O00268 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.46■□□□□ 0.87
TAF4O00268 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.46■□□□□ 0.87
TAF4O00268 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TAF4O00268 AC073912.3-201ENST00000624414 853 ntBASIC20.46■□□□□ 0.87
TAF4O00268 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TAF4O00268 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TAF4O00268 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TAF4O00268 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TAF4O00268 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.45■□□□□ 0.86
TAF4O00268 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TAF4O00268 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TAF4O00268 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.45■□□□□ 0.86
TAF4O00268 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TAF4O00268 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.45■□□□□ 0.86
TAF4O00268 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.45■□□□□ 0.86
TAF4O00268 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.45■□□□□ 0.86
TAF4O00268 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.45■□□□□ 0.86
TAF4O00268 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TAF4O00268 MYC-209ENST00000641252 345 ntBASIC20.45■□□□□ 0.86
TAF4O00268 AC068587.7-201ENST00000641602 218 ntBASIC20.45■□□□□ 0.86
TAF4O00268 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TAF4O00268 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TAF4O00268 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TAF4O00268 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TAF4O00268 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TAF4O00268 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TAF4O00268 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TAF4O00268 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.44■□□□□ 0.86
TAF4O00268 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TAF4O00268 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms