Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 SNORA78-201ENST00000459373 127 ntBASIC20.66■□□□□ 0.9
C4orf47A7E2U8 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 Z99916.2-201ENST00000604037 246 ntBASIC20.66■□□□□ 0.9
C4orf47A7E2U8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C4orf47A7E2U8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.65■□□□□ 0.9
C4orf47A7E2U8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C4orf47A7E2U8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C4orf47A7E2U8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C4orf47A7E2U8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.65■□□□□ 0.9
C4orf47A7E2U8 LINC01960-201ENST00000563759 1884 ntBASIC20.65■□□□□ 0.9
C4orf47A7E2U8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C4orf47A7E2U8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
C4orf47A7E2U8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C4orf47A7E2U8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C4orf47A7E2U8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
C4orf47A7E2U8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.65■□□□□ 0.9
C4orf47A7E2U8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.65■□□□□ 0.9
C4orf47A7E2U8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
C4orf47A7E2U8 LINC01023-201ENST00000606054 436 ntBASIC20.65■□□□□ 0.9
C4orf47A7E2U8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
C4orf47A7E2U8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
C4orf47A7E2U8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C4orf47A7E2U8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
C4orf47A7E2U8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C4orf47A7E2U8 KRT18P21-201ENST00000515767 1272 ntBASIC20.64■□□□□ 0.89
C4orf47A7E2U8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C4orf47A7E2U8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.64■□□□□ 0.89
C4orf47A7E2U8 CYP2T3P-201ENST00000601990 817 ntBASIC20.64■□□□□ 0.89
C4orf47A7E2U8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
C4orf47A7E2U8 AC133561.1-201ENST00000568600 2415 ntBASIC20.64■□□□□ 0.89
C4orf47A7E2U8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
C4orf47A7E2U8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 AC060766.5-201ENST00000590539 871 ntBASIC20.63■□□□□ 0.89
C4orf47A7E2U8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.63■□□□□ 0.89
C4orf47A7E2U8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C4orf47A7E2U8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 AL355472.2-201ENST00000422958 438 ntBASIC20.61■□□□□ 0.89
C4orf47A7E2U8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.61■□□□□ 0.89
C4orf47A7E2U8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms