Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT1A5YKK6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT1A5YKK6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.33■□□□□ 0.85
CNOT1A5YKK6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT1A5YKK6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT1A5YKK6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT1A5YKK6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CNOT1A5YKK6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.33■□□□□ 0.85
CNOT1A5YKK6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.33■□□□□ 0.85
CNOT1A5YKK6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.33■□□□□ 0.84
CNOT1A5YKK6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CNOT1A5YKK6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNOT1A5YKK6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.32■□□□□ 0.84
CNOT1A5YKK6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT1A5YKK6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.31■□□□□ 0.84
CNOT1A5YKK6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CNOT1A5YKK6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.31■□□□□ 0.84
CNOT1A5YKK6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT1A5YKK6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.31■□□□□ 0.84
CNOT1A5YKK6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT1A5YKK6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CNOT1A5YKK6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.31■□□□□ 0.84
CNOT1A5YKK6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT1A5YKK6 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.31■□□□□ 0.84
CNOT1A5YKK6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT1A5YKK6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.31■□□□□ 0.84
CNOT1A5YKK6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT1A5YKK6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
CNOT1A5YKK6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CNOT1A5YKK6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT1A5YKK6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT1A5YKK6 AL049597.2-201ENST00000565575 961 ntBASIC20.3■□□□□ 0.84
CNOT1A5YKK6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.3■□□□□ 0.84
CNOT1A5YKK6 AC092865.7-201ENST00000641832 219 ntBASIC20.3■□□□□ 0.84
CNOT1A5YKK6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT1A5YKK6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CNOT1A5YKK6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.3■□□□□ 0.84
CNOT1A5YKK6 AL139125.2-201ENST00000623134 1869 ntBASIC20.3■□□□□ 0.84
CNOT1A5YKK6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT1A5YKK6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT1A5YKK6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.3■□□□□ 0.84
CNOT1A5YKK6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.3■□□□□ 0.84
CNOT1A5YKK6 AL589743.5-201ENST00000616611 1050 ntBASIC20.3■□□□□ 0.84
CNOT1A5YKK6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.3■□□□□ 0.84
CNOT1A5YKK6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 AC053503.5-201ENST00000601508 636 ntBASIC20.29■□□□□ 0.84
CNOT1A5YKK6 AC100791.3-201ENST00000617619 330 ntBASIC20.29■□□□□ 0.84
CNOT1A5YKK6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.29■□□□□ 0.84
CNOT1A5YKK6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 LINC00526-201ENST00000581067 1875 ntBASIC20.28■□□□□ 0.84
CNOT1A5YKK6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms