Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
CLRN2A0PK11 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CLRN2A0PK11 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.61
CLRN2A0PK11 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.08■■□□□ 1.6
CLRN2A0PK11 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
CLRN2A0PK11 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.07■■□□□ 1.6
CLRN2A0PK11 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CLRN2A0PK11 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CLRN2A0PK11 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CLRN2A0PK11 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CLRN2A0PK11 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC25.07■■□□□ 1.6
CLRN2A0PK11 AC026366.1-201ENST00000488803 879 ntBASIC25.07■■□□□ 1.6
CLRN2A0PK11 AC073648.6-201ENST00000641589 218 ntBASIC25.07■■□□□ 1.6
CLRN2A0PK11 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CLRN2A0PK11 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CLRN2A0PK11 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.07■■□□□ 1.6
CLRN2A0PK11 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CLRN2A0PK11 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.07■■□□□ 1.6
CLRN2A0PK11 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLRN2A0PK11 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLRN2A0PK11 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CLRN2A0PK11 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLRN2A0PK11 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLRN2A0PK11 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLRN2A0PK11 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CLRN2A0PK11 AL596275.1-201ENST00000423464 877 ntBASIC25.06■■□□□ 1.6
CLRN2A0PK11 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLRN2A0PK11 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC25.06■■□□□ 1.6
CLRN2A0PK11 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLRN2A0PK11 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC25.06■■□□□ 1.6
CLRN2A0PK11 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC25.06■■□□□ 1.6
CLRN2A0PK11 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.06■■□□□ 1.6
CLRN2A0PK11 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.06■■□□□ 1.6
CLRN2A0PK11 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLRN2A0PK11 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
CLRN2A0PK11 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CLRN2A0PK11 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.05■■□□□ 1.6
CLRN2A0PK11 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLRN2A0PK11 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLRN2A0PK11 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLRN2A0PK11 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CLRN2A0PK11 AC091799.1-201ENST00000422823 811 ntBASIC25.05■■□□□ 1.6
CLRN2A0PK11 GATS-209ENST00000454084 1030 ntTSL 3 BASIC25.05■■□□□ 1.6
CLRN2A0PK11 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.05■■□□□ 1.6
CLRN2A0PK11 AP003097.1-201ENST00000530657 1135 ntBASIC25.05■■□□□ 1.6
CLRN2A0PK11 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.05■■□□□ 1.6
CLRN2A0PK11 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC25.05■■□□□ 1.6
CLRN2A0PK11 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC25.05■■□□□ 1.6
CLRN2A0PK11 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.05■■□□□ 1.6
CLRN2A0PK11 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLRN2A0PK11 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CLRN2A0PK11 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.05■■□□□ 1.6
CLRN2A0PK11 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLRN2A0PK11 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLRN2A0PK11 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC25.04■■□□□ 1.6
CLRN2A0PK11 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLRN2A0PK11 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLRN2A0PK11 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLRN2A0PK11 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.04■■□□□ 1.6
CLRN2A0PK11 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CLRN2A0PK11 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLRN2A0PK11 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CLRN2A0PK11 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CLRN2A0PK11 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CLRN2A0PK11 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CLRN2A0PK11 AC026471.6-201ENST00000622954 1905 ntBASIC25.04■■□□□ 1.6
CLRN2A0PK11 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLRN2A0PK11 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.03■■□□□ 1.6
CLRN2A0PK11 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CLRN2A0PK11 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLRN2A0PK11 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CLRN2A0PK11 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.03■■□□□ 1.6
CLRN2A0PK11 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.03■■□□□ 1.6
CLRN2A0PK11 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CLRN2A0PK11 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
CLRN2A0PK11 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.03■■□□□ 1.6
CLRN2A0PK11 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.02■■□□□ 1.6
CLRN2A0PK11 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.02■■□□□ 1.6
CLRN2A0PK11 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CLRN2A0PK11 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
CLRN2A0PK11 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.02■■□□□ 1.6
CLRN2A0PK11 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CLRN2A0PK11 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CLRN2A0PK11 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CLRN2A0PK11 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.01■■□□□ 1.59
CLRN2A0PK11 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLRN2A0PK11 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.01■■□□□ 1.59
CLRN2A0PK11 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLRN2A0PK11 BAALC-201ENST00000297574 801 ntTSL 3 BASIC25.01■■□□□ 1.59
CLRN2A0PK11 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLRN2A0PK11 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.01■■□□□ 1.59
CLRN2A0PK11 PEX7-202ENST00000367756 680 ntTSL 3 BASIC25.01■■□□□ 1.59
CLRN2A0PK11 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
CLRN2A0PK11 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLRN2A0PK11 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.01■■□□□ 1.59
CLRN2A0PK11 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC25.01■■□□□ 1.59
CLRN2A0PK11 RPS2P4-201ENST00000476944 856 ntBASIC25.01■■□□□ 1.59
CLRN2A0PK11 UNC93B4-201ENST00000505679 747 ntBASIC25.01■■□□□ 1.59
CLRN2A0PK11 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.01■■□□□ 1.59
CLRN2A0PK11 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms