Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.03■■□□□ 1.44
PTCH2Q9Y6C5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC24.03■■□□□ 1.44
PTCH2Q9Y6C5 AC243732.1-201ENST00000612648 864 ntBASIC24.03■■□□□ 1.44
PTCH2Q9Y6C5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PTCH2Q9Y6C5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
PTCH2Q9Y6C5 KRT16P2-201ENST00000414673 1423 ntBASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 PNMA6B-201ENST00000538162 1200 ntBASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PTCH2Q9Y6C5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
PTCH2Q9Y6C5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PTCH2Q9Y6C5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PTCH2Q9Y6C5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24■■□□□ 1.43
PTCH2Q9Y6C5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24■■□□□ 1.43
PTCH2Q9Y6C5 AC004812.2-201ENST00000611079 2094 ntBASIC24■■□□□ 1.43
PTCH2Q9Y6C5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PTCH2Q9Y6C5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PTCH2Q9Y6C5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC24■■□□□ 1.43
PTCH2Q9Y6C5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC24■■□□□ 1.43
PTCH2Q9Y6C5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
PTCH2Q9Y6C5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PTCH2Q9Y6C5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
PTCH2Q9Y6C5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PTCH2Q9Y6C5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC24■■□□□ 1.43
PTCH2Q9Y6C5 LINC01960-201ENST00000563759 1884 ntBASIC24■■□□□ 1.43
PTCH2Q9Y6C5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PTCH2Q9Y6C5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.99■■□□□ 1.43
PTCH2Q9Y6C5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PTCH2Q9Y6C5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PTCH2Q9Y6C5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
PTCH2Q9Y6C5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PTCH2Q9Y6C5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.99■■□□□ 1.43
PTCH2Q9Y6C5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
PTCH2Q9Y6C5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PTCH2Q9Y6C5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 TSPY7P-201ENST00000431358 1114 ntBASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 AC069544.1-201ENST00000609399 999 ntBASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 LINC00526-201ENST00000581067 1875 ntBASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCH2Q9Y6C5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
PTCH2Q9Y6C5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.97■■□□□ 1.43
PTCH2Q9Y6C5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PTCH2Q9Y6C5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PTCH2Q9Y6C5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.97■■□□□ 1.43
PTCH2Q9Y6C5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PTCH2Q9Y6C5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.97■■□□□ 1.43
PTCH2Q9Y6C5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PTCH2Q9Y6C5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PTCH2Q9Y6C5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.97■■□□□ 1.43
PTCH2Q9Y6C5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.97■■□□□ 1.43
PTCH2Q9Y6C5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.97■■□□□ 1.43
PTCH2Q9Y6C5 AC133561.5-201ENST00000635547 218 ntBASIC23.97■■□□□ 1.43
PTCH2Q9Y6C5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.96■■□□□ 1.43
PTCH2Q9Y6C5 AC092368.3-202ENST00000574180 1591 ntBASIC23.96■■□□□ 1.43
PTCH2Q9Y6C5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PTCH2Q9Y6C5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PTCH2Q9Y6C5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.96■■□□□ 1.43
PTCH2Q9Y6C5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms