Protein–RNA interactions for Protein: Q9Y678

COPG1, Coatomer subunit gamma-1, humanhuman

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1Q9Y678 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COPG1Q9Y678 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
COPG1Q9Y678 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COPG1Q9Y678 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COPG1Q9Y678 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.68■□□□□ 0.9
COPG1Q9Y678 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
COPG1Q9Y678 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.68■□□□□ 0.9
COPG1Q9Y678 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPG1Q9Y678 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPG1Q9Y678 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPG1Q9Y678 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPG1Q9Y678 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPG1Q9Y678 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
COPG1Q9Y678 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.68■□□□□ 0.9
COPG1Q9Y678 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPG1Q9Y678 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.67■□□□□ 0.9
COPG1Q9Y678 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.67■□□□□ 0.9
COPG1Q9Y678 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.67■□□□□ 0.9
COPG1Q9Y678 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.67■□□□□ 0.9
COPG1Q9Y678 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COPG1Q9Y678 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPG1Q9Y678 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPG1Q9Y678 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPG1Q9Y678 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.67■□□□□ 0.9
COPG1Q9Y678 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.67■□□□□ 0.9
COPG1Q9Y678 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COPG1Q9Y678 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COPG1Q9Y678 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPG1Q9Y678 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COPG1Q9Y678 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
COPG1Q9Y678 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPG1Q9Y678 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPG1Q9Y678 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.66■□□□□ 0.9
COPG1Q9Y678 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.66■□□□□ 0.9
COPG1Q9Y678 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.66■□□□□ 0.9
COPG1Q9Y678 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.66■□□□□ 0.9
COPG1Q9Y678 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.66■□□□□ 0.9
COPG1Q9Y678 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.66■□□□□ 0.9
COPG1Q9Y678 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COPG1Q9Y678 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.66■□□□□ 0.9
COPG1Q9Y678 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPG1Q9Y678 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.66■□□□□ 0.9
COPG1Q9Y678 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPG1Q9Y678 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPG1Q9Y678 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.66■□□□□ 0.9
COPG1Q9Y678 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPG1Q9Y678 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.65■□□□□ 0.9
COPG1Q9Y678 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPG1Q9Y678 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPG1Q9Y678 OR7E47P-201ENST00000546390 1422 ntBASIC20.65■□□□□ 0.9
COPG1Q9Y678 BX842568.3-201ENST00000418104 571 ntBASIC20.65■□□□□ 0.9
COPG1Q9Y678 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.65■□□□□ 0.9
COPG1Q9Y678 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
COPG1Q9Y678 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPG1Q9Y678 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPG1Q9Y678 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPG1Q9Y678 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPG1Q9Y678 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.65■□□□□ 0.9
COPG1Q9Y678 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPG1Q9Y678 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COPG1Q9Y678 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
COPG1Q9Y678 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.64■□□□□ 0.9
COPG1Q9Y678 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPG1Q9Y678 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPG1Q9Y678 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPG1Q9Y678 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.64■□□□□ 0.89
COPG1Q9Y678 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COPG1Q9Y678 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.64■□□□□ 0.89
COPG1Q9Y678 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.64■□□□□ 0.89
COPG1Q9Y678 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COPG1Q9Y678 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPG1Q9Y678 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPG1Q9Y678 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPG1Q9Y678 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.64■□□□□ 0.89
COPG1Q9Y678 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPG1Q9Y678 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.64■□□□□ 0.89
COPG1Q9Y678 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COPG1Q9Y678 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COPG1Q9Y678 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPG1Q9Y678 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.63■□□□□ 0.89
COPG1Q9Y678 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPG1Q9Y678 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPG1Q9Y678 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPG1Q9Y678 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.63■□□□□ 0.89
COPG1Q9Y678 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
COPG1Q9Y678 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPG1Q9Y678 AC006455.2-201ENST00000429931 906 ntBASIC20.63■□□□□ 0.89
COPG1Q9Y678 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COPG1Q9Y678 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.63■□□□□ 0.89
COPG1Q9Y678 MIR3181-201ENST00000578512 73 ntBASIC20.63■□□□□ 0.89
COPG1Q9Y678 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.63■□□□□ 0.89
COPG1Q9Y678 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
COPG1Q9Y678 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.63■□□□□ 0.89
COPG1Q9Y678 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPG1Q9Y678 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPG1Q9Y678 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.63■□□□□ 0.89
COPG1Q9Y678 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.63■□□□□ 0.89
COPG1Q9Y678 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
COPG1Q9Y678 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPG1Q9Y678 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms