Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SCN10AQ9Y5Y9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
SCN10AQ9Y5Y9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SCN10AQ9Y5Y9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SCN10AQ9Y5Y9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SCN10AQ9Y5Y9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCN10AQ9Y5Y9 AC091799.1-201ENST00000422823 811 ntBASIC23.34■■□□□ 1.33
SCN10AQ9Y5Y9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCN10AQ9Y5Y9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.34■■□□□ 1.33
SCN10AQ9Y5Y9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SCN10AQ9Y5Y9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SCN10AQ9Y5Y9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.34■■□□□ 1.33
SCN10AQ9Y5Y9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SCN10AQ9Y5Y9 KRT17P1-201ENST00000399211 1546 ntBASIC23.33■■□□□ 1.33
SCN10AQ9Y5Y9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.33■■□□□ 1.33
SCN10AQ9Y5Y9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SCN10AQ9Y5Y9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCN10AQ9Y5Y9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCN10AQ9Y5Y9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCN10AQ9Y5Y9 ESRRAP1-201ENST00000400596 1257 ntBASIC23.33■■□□□ 1.33
SCN10AQ9Y5Y9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SCN10AQ9Y5Y9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.33■■□□□ 1.33
SCN10AQ9Y5Y9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.33■■□□□ 1.33
SCN10AQ9Y5Y9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.33■■□□□ 1.33
SCN10AQ9Y5Y9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
SCN10AQ9Y5Y9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 AL355472.2-201ENST00000422958 438 ntBASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 AP003097.1-201ENST00000530657 1135 ntBASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 AC142381.4-202ENST00000563973 229 ntBASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.32■■□□□ 1.32
SCN10AQ9Y5Y9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 AC006058.3-201ENST00000606217 1069 ntBASIC23.31■■□□□ 1.32
SCN10AQ9Y5Y9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCN10AQ9Y5Y9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.3■■□□□ 1.32
SCN10AQ9Y5Y9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCN10AQ9Y5Y9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
SCN10AQ9Y5Y9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.3■■□□□ 1.32
SCN10AQ9Y5Y9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.3■■□□□ 1.32
SCN10AQ9Y5Y9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.3■■□□□ 1.32
SCN10AQ9Y5Y9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCN10AQ9Y5Y9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 AC026366.1-201ENST00000488803 879 ntBASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCN10AQ9Y5Y9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCN10AQ9Y5Y9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
SCN10AQ9Y5Y9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCN10AQ9Y5Y9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.28■■□□□ 1.32
SCN10AQ9Y5Y9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SCN10AQ9Y5Y9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.28■■□□□ 1.32
SCN10AQ9Y5Y9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.28■■□□□ 1.32
SCN10AQ9Y5Y9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
SCN10AQ9Y5Y9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SCN10AQ9Y5Y9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SCN10AQ9Y5Y9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SCN10AQ9Y5Y9 CYP2T3P-201ENST00000601990 817 ntBASIC23.27■■□□□ 1.32
SCN10AQ9Y5Y9 FAM21FP-204ENST00000608637 956 ntBASIC23.27■■□□□ 1.32
SCN10AQ9Y5Y9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SCN10AQ9Y5Y9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
SCN10AQ9Y5Y9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms