Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HRH3Q9Y5N1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HRH3Q9Y5N1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HRH3Q9Y5N1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HRH3Q9Y5N1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HRH3Q9Y5N1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HRH3Q9Y5N1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 KRT19P1-201ENST00000405746 1186 ntBASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 KRT87P-202ENST00000534226 1464 ntBASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.41■□□□□ 0.7
HRH3Q9Y5N1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HRH3Q9Y5N1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HRH3Q9Y5N1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HRH3Q9Y5N1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HRH3Q9Y5N1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HRH3Q9Y5N1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.4■□□□□ 0.7
HRH3Q9Y5N1 AC104187.1-201ENST00000607510 612 ntBASIC19.4■□□□□ 0.7
HRH3Q9Y5N1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.4■□□□□ 0.7
HRH3Q9Y5N1 BID-214ENST00000617586 542 ntTSL 5 BASIC19.4■□□□□ 0.7
HRH3Q9Y5N1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HRH3Q9Y5N1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HRH3Q9Y5N1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HRH3Q9Y5N1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HRH3Q9Y5N1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
HRH3Q9Y5N1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HRH3Q9Y5N1 C11orf96-202ENST00000528572 1834 ntBASIC19.39■□□□□ 0.7
HRH3Q9Y5N1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 AC026185.1-201ENST00000445748 174 ntBASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
HRH3Q9Y5N1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 CROCCP5-201ENST00000436658 830 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms