Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB13Q9Y5F0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB13Q9Y5F0 Z98882.1-201ENST00000622160 2253 ntBASIC23.26■■□□□ 1.31
PCDHB13Q9Y5F0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB13Q9Y5F0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB13Q9Y5F0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PCDHB13Q9Y5F0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDHB13Q9Y5F0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 DUX4L2-201ENST00000561772 1275 ntBASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 RARRES2P6-201ENST00000567333 442 ntBASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 AC087623.3-201ENST00000607047 1098 ntBASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 DUX4L6-201ENST00000626483 1275 ntBASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 DUX4L1-201ENST00000627662 1275 ntBASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 DUX4L8-201ENST00000629013 1275 ntBASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 DUX4L3-201ENST00000630187 1275 ntBASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 DUX4L7-201ENST00000630678 1275 ntBASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 DUX4L5-201ENST00000630834 1275 ntBASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 AC026310.3-201ENST00000625186 2373 ntBASIC23.25■■□□□ 1.31
PCDHB13Q9Y5F0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB13Q9Y5F0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB13Q9Y5F0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB13Q9Y5F0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB13Q9Y5F0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
PCDHB13Q9Y5F0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB13Q9Y5F0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHB13Q9Y5F0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.23■■□□□ 1.31
PCDHB13Q9Y5F0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB13Q9Y5F0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 AP004607.4-201ENST00000530158 1459 ntBASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB13Q9Y5F0 AL137060.1-201ENST00000618151 2648 ntBASIC23.21■■□□□ 1.31
PCDHB13Q9Y5F0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHB13Q9Y5F0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB13Q9Y5F0 AC138907.5-202ENST00000569484 235 ntBASIC23.21■■□□□ 1.31
PCDHB13Q9Y5F0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHB13Q9Y5F0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHB13Q9Y5F0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 AC004854.2-201ENST00000608450 1441 ntBASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms