Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CTDP1Q9Y5B0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CTDP1Q9Y5B0 KRT16P2-201ENST00000414673 1423 ntBASIC24.37■■□□□ 1.49
CTDP1Q9Y5B0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.37■■□□□ 1.49
CTDP1Q9Y5B0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.37■■□□□ 1.49
CTDP1Q9Y5B0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CTDP1Q9Y5B0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CTDP1Q9Y5B0 CD99P1-205ENST00000527459 561 ntBASIC24.37■■□□□ 1.49
CTDP1Q9Y5B0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.37■■□□□ 1.49
CTDP1Q9Y5B0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CTDP1Q9Y5B0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CTDP1Q9Y5B0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CTDP1Q9Y5B0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CTDP1Q9Y5B0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.36■■□□□ 1.49
CTDP1Q9Y5B0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CTDP1Q9Y5B0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC24.35■■□□□ 1.49
CTDP1Q9Y5B0 AC003102.1-202ENST00000563394 1796 ntBASIC24.35■■□□□ 1.49
CTDP1Q9Y5B0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.35■■□□□ 1.49
CTDP1Q9Y5B0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.35■■□□□ 1.49
CTDP1Q9Y5B0 AC133041.1-202ENST00000642053 222 ntBASIC24.35■■□□□ 1.49
CTDP1Q9Y5B0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 MKRN4P-201ENST00000444706 1521 ntBASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 AC127496.7-201ENST00000625110 1798 ntBASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.34■■□□□ 1.49
CTDP1Q9Y5B0 AC061975.6-201ENST00000579045 1553 ntBASIC24.33■■□□□ 1.49
CTDP1Q9Y5B0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.33■■□□□ 1.49
CTDP1Q9Y5B0 AC080038.3-201ENST00000623346 1952 ntBASIC24.33■■□□□ 1.49
CTDP1Q9Y5B0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CTDP1Q9Y5B0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.33■■□□□ 1.49
CTDP1Q9Y5B0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CTDP1Q9Y5B0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.33■■□□□ 1.49
CTDP1Q9Y5B0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.33■■□□□ 1.49
CTDP1Q9Y5B0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.33■■□□□ 1.49
CTDP1Q9Y5B0 OR10C1-204ENST00000622521 1039 ntBASIC24.33■■□□□ 1.49
CTDP1Q9Y5B0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CTDP1Q9Y5B0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CTDP1Q9Y5B0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
CTDP1Q9Y5B0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.33■■□□□ 1.48
CTDP1Q9Y5B0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC24.32■■□□□ 1.48
CTDP1Q9Y5B0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CTDP1Q9Y5B0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTDP1Q9Y5B0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.32■■□□□ 1.48
CTDP1Q9Y5B0 C9orf163-202ENST00000624034 2573 ntBASIC24.32■■□□□ 1.48
CTDP1Q9Y5B0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CTDP1Q9Y5B0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTDP1Q9Y5B0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.32■■□□□ 1.48
CTDP1Q9Y5B0 AC069152.1-201ENST00000438030 544 ntBASIC24.32■■□□□ 1.48
CTDP1Q9Y5B0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.32■■□□□ 1.48
CTDP1Q9Y5B0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CTDP1Q9Y5B0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.32■■□□□ 1.48
CTDP1Q9Y5B0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTDP1Q9Y5B0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 KRT18P6-201ENST00000555540 1265 ntBASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 MIR4758-201ENST00000577688 71 ntBASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CTDP1Q9Y5B0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CTDP1Q9Y5B0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms