Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
SIT1Q9Y3P8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SIT1Q9Y3P8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIT1Q9Y3P8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SIT1Q9Y3P8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SIT1Q9Y3P8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIT1Q9Y3P8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.36■■□□□ 1.01
SIT1Q9Y3P8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.36■■□□□ 1.01
SIT1Q9Y3P8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIT1Q9Y3P8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIT1Q9Y3P8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
SIT1Q9Y3P8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SIT1Q9Y3P8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SIT1Q9Y3P8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SIT1Q9Y3P8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.35■■□□□ 1.01
SIT1Q9Y3P8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SIT1Q9Y3P8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SIT1Q9Y3P8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
SIT1Q9Y3P8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.35■■□□□ 1.01
SIT1Q9Y3P8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SIT1Q9Y3P8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.35■■□□□ 1.01
SIT1Q9Y3P8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.35■■□□□ 1.01
SIT1Q9Y3P8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.35■■□□□ 1.01
SIT1Q9Y3P8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SIT1Q9Y3P8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.34■■□□□ 1.01
SIT1Q9Y3P8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SIT1Q9Y3P8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.34■■□□□ 1.01
SIT1Q9Y3P8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SIT1Q9Y3P8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SIT1Q9Y3P8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.34■■□□□ 1.01
SIT1Q9Y3P8 PNMA6B-201ENST00000538162 1200 ntBASIC21.34■■□□□ 1.01
SIT1Q9Y3P8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SIT1Q9Y3P8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SIT1Q9Y3P8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.34■■□□□ 1.01
SIT1Q9Y3P8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SIT1Q9Y3P8 ANOS2P-203ENST00000472227 1816 ntBASIC21.34■■□□□ 1.01
SIT1Q9Y3P8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SIT1Q9Y3P8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.33■■□□□ 1.01
SIT1Q9Y3P8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
SIT1Q9Y3P8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SIT1Q9Y3P8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SIT1Q9Y3P8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SIT1Q9Y3P8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.33■■□□□ 1.01
SIT1Q9Y3P8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SIT1Q9Y3P8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SIT1Q9Y3P8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SIT1Q9Y3P8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.33■■□□□ 1.01
SIT1Q9Y3P8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.33■■□□□ 1.01
SIT1Q9Y3P8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SIT1Q9Y3P8 AC100791.3-201ENST00000617619 330 ntBASIC21.33■■□□□ 1.01
SIT1Q9Y3P8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.33■■□□□ 1
SIT1Q9Y3P8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.33■■□□□ 1
SIT1Q9Y3P8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SIT1Q9Y3P8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.32■■□□□ 1
SIT1Q9Y3P8 AC061975.6-201ENST00000579045 1553 ntBASIC21.32■■□□□ 1
SIT1Q9Y3P8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SIT1Q9Y3P8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SIT1Q9Y3P8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.32■■□□□ 1
SIT1Q9Y3P8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIT1Q9Y3P8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SIT1Q9Y3P8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.32■■□□□ 1
SIT1Q9Y3P8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SIT1Q9Y3P8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.32■■□□□ 1
SIT1Q9Y3P8 KRT18P21-201ENST00000515767 1272 ntBASIC21.32■■□□□ 1
SIT1Q9Y3P8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.32■■□□□ 1
SIT1Q9Y3P8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.32■■□□□ 1
SIT1Q9Y3P8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.32■■□□□ 1
SIT1Q9Y3P8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.32■■□□□ 1
SIT1Q9Y3P8 FAM21FP-204ENST00000608637 956 ntBASIC21.32■■□□□ 1
SIT1Q9Y3P8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.32■■□□□ 1
SIT1Q9Y3P8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SIT1Q9Y3P8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIT1Q9Y3P8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.32■■□□□ 1
SIT1Q9Y3P8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIT1Q9Y3P8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SIT1Q9Y3P8 AC092368.3-202ENST00000574180 1591 ntBASIC21.31■■□□□ 1
SIT1Q9Y3P8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SIT1Q9Y3P8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SIT1Q9Y3P8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.31■■□□□ 1
SIT1Q9Y3P8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SIT1Q9Y3P8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SIT1Q9Y3P8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.31■■□□□ 1
SIT1Q9Y3P8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SIT1Q9Y3P8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.31■■□□□ 1
SIT1Q9Y3P8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.31■■□□□ 1
SIT1Q9Y3P8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
SIT1Q9Y3P8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
SIT1Q9Y3P8 AC092068.2-201ENST00000590491 1708 ntBASIC21.31■■□□□ 1
SIT1Q9Y3P8 AC020928.2-201ENST00000588717 2197 ntBASIC21.31■■□□□ 1
SIT1Q9Y3P8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SIT1Q9Y3P8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.3■■□□□ 1
SIT1Q9Y3P8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
SIT1Q9Y3P8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.3■■□□□ 1
SIT1Q9Y3P8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.3■■□□□ 1
SIT1Q9Y3P8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SIT1Q9Y3P8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SIT1Q9Y3P8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.3■■□□□ 1
SIT1Q9Y3P8 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.3■■□□□ 1
SIT1Q9Y3P8 AL589743.5-201ENST00000616611 1050 ntBASIC21.3■■□□□ 1
SIT1Q9Y3P8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms