Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 OR2A1-AS1-201ENST00000462305 773 ntBASIC32.79■■■□□ 2.84
CDK11AQ9UQ88 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC32.79■■■□□ 2.84
CDK11AQ9UQ88 UNC93B5-201ENST00000530315 699 ntBASIC32.79■■■□□ 2.84
CDK11AQ9UQ88 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC32.79■■■□□ 2.84
CDK11AQ9UQ88 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC32.79■■■□□ 2.84
CDK11AQ9UQ88 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CDK11AQ9UQ88 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CDK11AQ9UQ88 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
CDK11AQ9UQ88 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
CDK11AQ9UQ88 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CDK11AQ9UQ88 LSM12P1-201ENST00000411836 588 ntBASIC32.78■■■□□ 2.84
CDK11AQ9UQ88 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC32.78■■■□□ 2.84
CDK11AQ9UQ88 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CDK11AQ9UQ88 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
CDK11AQ9UQ88 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CDK11AQ9UQ88 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
CDK11AQ9UQ88 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CDK11AQ9UQ88 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC32.77■■■□□ 2.84
CDK11AQ9UQ88 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC32.77■■■□□ 2.84
CDK11AQ9UQ88 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC32.77■■■□□ 2.84
CDK11AQ9UQ88 AC128676.1-201ENST00000454392 318 ntBASIC32.77■■■□□ 2.84
CDK11AQ9UQ88 FAM21FP-204ENST00000608637 956 ntBASIC32.77■■■□□ 2.84
CDK11AQ9UQ88 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CDK11AQ9UQ88 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC32.77■■■□□ 2.84
CDK11AQ9UQ88 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
CDK11AQ9UQ88 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CDK11AQ9UQ88 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
CDK11AQ9UQ88 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC32.76■■■□□ 2.84
CDK11AQ9UQ88 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC32.76■■■□□ 2.83
CDK11AQ9UQ88 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC32.76■■■□□ 2.83
CDK11AQ9UQ88 AC026366.1-201ENST00000488803 879 ntBASIC32.76■■■□□ 2.83
CDK11AQ9UQ88 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC32.76■■■□□ 2.83
CDK11AQ9UQ88 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
CDK11AQ9UQ88 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC32.76■■■□□ 2.83
CDK11AQ9UQ88 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC32.76■■■□□ 2.83
CDK11AQ9UQ88 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 CASP6-205ENST00000505486 538 ntTSL 4 BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 AC100791.3-201ENST00000617619 330 ntBASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC32.75■■■□□ 2.83
CDK11AQ9UQ88 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CDK11AQ9UQ88 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CDK11AQ9UQ88 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
CDK11AQ9UQ88 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CDK11AQ9UQ88 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC32.74■■■□□ 2.83
CDK11AQ9UQ88 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CDK11AQ9UQ88 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC32.74■■■□□ 2.83
CDK11AQ9UQ88 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CDK11AQ9UQ88 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CDK11AQ9UQ88 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC32.73■■■□□ 2.83
CDK11AQ9UQ88 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CDK11AQ9UQ88 AC091799.1-201ENST00000422823 811 ntBASIC32.73■■■□□ 2.83
CDK11AQ9UQ88 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC32.73■■■□□ 2.83
CDK11AQ9UQ88 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CDK11AQ9UQ88 MMD2-204ENST00000612910 778 ntTSL 5 BASIC32.73■■■□□ 2.83
CDK11AQ9UQ88 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CDK11AQ9UQ88 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CDK11AQ9UQ88 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CDK11AQ9UQ88 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CDK11AQ9UQ88 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CDK11AQ9UQ88 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC32.72■■■□□ 2.83
CDK11AQ9UQ88 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC32.72■■■□□ 2.83
CDK11AQ9UQ88 AC142381.4-202ENST00000563973 229 ntBASIC32.72■■■□□ 2.83
CDK11AQ9UQ88 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC32.72■■■□□ 2.83
CDK11AQ9UQ88 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC32.71■■■□□ 2.83
CDK11AQ9UQ88 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC32.71■■■□□ 2.83
CDK11AQ9UQ88 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC32.71■■■□□ 2.83
CDK11AQ9UQ88 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CDK11AQ9UQ88 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CDK11AQ9UQ88 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC32.71■■■□□ 2.83
CDK11AQ9UQ88 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC32.71■■■□□ 2.83
CDK11AQ9UQ88 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CDK11AQ9UQ88 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CDK11AQ9UQ88 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CDK11AQ9UQ88 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CDK11AQ9UQ88 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CDK11AQ9UQ88 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC32.7■■■□□ 2.83
CDK11AQ9UQ88 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC32.7■■■□□ 2.83
CDK11AQ9UQ88 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
CDK11AQ9UQ88 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CDK11AQ9UQ88 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC32.7■■■□□ 2.83
CDK11AQ9UQ88 BAALC-201ENST00000297574 801 ntTSL 3 BASIC32.7■■■□□ 2.83
CDK11AQ9UQ88 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CDK11AQ9UQ88 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC32.7■■■□□ 2.83
CDK11AQ9UQ88 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CDK11AQ9UQ88 AP003097.1-201ENST00000530657 1135 ntBASIC32.7■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms