Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 DUSP5P2-201ENST00000426873 1033 ntBASIC31.65■■■□□ 2.66
SHANK2Q9UPX8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC31.65■■■□□ 2.66
SHANK2Q9UPX8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC31.65■■■□□ 2.66
SHANK2Q9UPX8 RPS2P52-201ENST00000469610 820 ntBASIC31.65■■■□□ 2.66
SHANK2Q9UPX8 FAM21FP-204ENST00000608637 956 ntBASIC31.65■■■□□ 2.66
SHANK2Q9UPX8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC31.64■■■□□ 2.66
SHANK2Q9UPX8 AC026471.6-201ENST00000622954 1905 ntBASIC31.64■■■□□ 2.66
SHANK2Q9UPX8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC31.64■■■□□ 2.66
SHANK2Q9UPX8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC31.64■■■□□ 2.66
SHANK2Q9UPX8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC31.64■■■□□ 2.66
SHANK2Q9UPX8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
SHANK2Q9UPX8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
SHANK2Q9UPX8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SHANK2Q9UPX8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SHANK2Q9UPX8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC31.63■■■□□ 2.65
SHANK2Q9UPX8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SHANK2Q9UPX8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SHANK2Q9UPX8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SHANK2Q9UPX8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC31.63■■■□□ 2.65
SHANK2Q9UPX8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC31.63■■■□□ 2.65
SHANK2Q9UPX8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SHANK2Q9UPX8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC31.63■■■□□ 2.65
SHANK2Q9UPX8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC31.62■■■□□ 2.65
SHANK2Q9UPX8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
SHANK2Q9UPX8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
SHANK2Q9UPX8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
SHANK2Q9UPX8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SHANK2Q9UPX8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC31.62■■■□□ 2.65
SHANK2Q9UPX8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC31.62■■■□□ 2.65
SHANK2Q9UPX8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SHANK2Q9UPX8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SHANK2Q9UPX8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC31.61■■■□□ 2.65
SHANK2Q9UPX8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SHANK2Q9UPX8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC31.61■■■□□ 2.65
SHANK2Q9UPX8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
SHANK2Q9UPX8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
SHANK2Q9UPX8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
SHANK2Q9UPX8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
SHANK2Q9UPX8 FAM99A-202ENST00000538190 1989 ntBASIC31.6■■■□□ 2.65
SHANK2Q9UPX8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SHANK2Q9UPX8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
SHANK2Q9UPX8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC31.6■■■□□ 2.65
SHANK2Q9UPX8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SHANK2Q9UPX8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 KRT18P29-201ENST00000397031 1267 ntBASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
SHANK2Q9UPX8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
SHANK2Q9UPX8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
SHANK2Q9UPX8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SHANK2Q9UPX8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
SHANK2Q9UPX8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SHANK2Q9UPX8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SHANK2Q9UPX8 AC098590.1-201ENST00000468126 897 ntBASIC31.58■■■□□ 2.65
SHANK2Q9UPX8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
SHANK2Q9UPX8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SHANK2Q9UPX8 AC068473.5-201ENST00000616428 2072 ntBASIC31.57■■■□□ 2.64
SHANK2Q9UPX8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
SHANK2Q9UPX8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC31.57■■■□□ 2.64
SHANK2Q9UPX8 AC245052.3-201ENST00000450182 901 ntBASIC31.57■■■□□ 2.64
SHANK2Q9UPX8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SHANK2Q9UPX8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
SHANK2Q9UPX8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SHANK2Q9UPX8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC31.57■■■□□ 2.64
SHANK2Q9UPX8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
SHANK2Q9UPX8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
SHANK2Q9UPX8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC31.56■■■□□ 2.64
SHANK2Q9UPX8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC31.56■■■□□ 2.64
SHANK2Q9UPX8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC31.56■■■□□ 2.64
SHANK2Q9UPX8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
SHANK2Q9UPX8 ADM-205ENST00000528544 586 ntTSL 2 BASIC31.54■■■□□ 2.64
SHANK2Q9UPX8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
SHANK2Q9UPX8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SHANK2Q9UPX8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC31.54■■■□□ 2.64
SHANK2Q9UPX8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms