Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.72■□□□□ 0.91
APOBEC3BQ9UH17 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.72■□□□□ 0.91
APOBEC3BQ9UH17 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.72■□□□□ 0.91
APOBEC3BQ9UH17 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.72■□□□□ 0.91
APOBEC3BQ9UH17 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
APOBEC3BQ9UH17 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.72■□□□□ 0.91
APOBEC3BQ9UH17 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APOBEC3BQ9UH17 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
APOBEC3BQ9UH17 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
APOBEC3BQ9UH17 AC003102.1-202ENST00000563394 1796 ntBASIC20.72■□□□□ 0.91
APOBEC3BQ9UH17 KRT16P2-201ENST00000414673 1423 ntBASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 CD99P1-205ENST00000527459 561 ntBASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 GUSBP5-202ENST00000510805 1989 ntBASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APOBEC3BQ9UH17 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
APOBEC3BQ9UH17 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 AC008694.1-202ENST00000636953 945 ntBASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
APOBEC3BQ9UH17 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 AC069152.1-201ENST00000438030 544 ntBASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 AC069236.1-201ENST00000604339 616 ntBASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOBEC3BQ9UH17 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
APOBEC3BQ9UH17 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOBEC3BQ9UH17 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOBEC3BQ9UH17 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.68■□□□□ 0.9
APOBEC3BQ9UH17 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOBEC3BQ9UH17 ABHD17AP1-201ENST00000358206 933 ntBASIC20.68■□□□□ 0.9
APOBEC3BQ9UH17 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOBEC3BQ9UH17 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.68■□□□□ 0.9
APOBEC3BQ9UH17 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.68■□□□□ 0.9
APOBEC3BQ9UH17 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.68■□□□□ 0.9
APOBEC3BQ9UH17 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOBEC3BQ9UH17 AC061975.6-201ENST00000579045 1553 ntBASIC20.68■□□□□ 0.9
APOBEC3BQ9UH17 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOBEC3BQ9UH17 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 KRT18P6-201ENST00000555540 1265 ntBASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 OR10C1-204ENST00000622521 1039 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms