Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 AL158211.5-201ENST00000623583 2518 ntBASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.58■□□□□ 0.25
SMCO4Q9NRQ5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
SMCO4Q9NRQ5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.58■□□□□ 0.25
SMCO4Q9NRQ5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMCO4Q9NRQ5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMCO4Q9NRQ5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMCO4Q9NRQ5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
SMCO4Q9NRQ5 LTB4R2-202ENST00000528054 3092 ntBASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 AC097358.2-201ENST00000607541 1159 ntBASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.58■□□□□ 0.24
SMCO4Q9NRQ5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMCO4Q9NRQ5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 AC090877.2-201ENST00000558441 1738 ntBASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 AC020916.1-201ENST00000587762 1774 ntBASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.56■□□□□ 0.24
SMCO4Q9NRQ5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms