Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.98■□□□□ 0.79
NANOGQ9H9S0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGQ9H9S0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGQ9H9S0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGQ9H9S0 AC006128.1-201ENST00000624704 1661 ntBASIC19.97■□□□□ 0.79
NANOGQ9H9S0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGQ9H9S0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGQ9H9S0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.97■□□□□ 0.79
NANOGQ9H9S0 MIR3621-201ENST00000580529 85 ntBASIC19.97■□□□□ 0.79
NANOGQ9H9S0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGQ9H9S0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.97■□□□□ 0.79
NANOGQ9H9S0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
NANOGQ9H9S0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NANOGQ9H9S0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NANOGQ9H9S0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
NANOGQ9H9S0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
NANOGQ9H9S0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NANOGQ9H9S0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.96■□□□□ 0.79
NANOGQ9H9S0 AC007952.6-201ENST00000573168 2673 ntBASIC19.96■□□□□ 0.79
NANOGQ9H9S0 AC003957.1-201ENST00000625108 2673 ntBASIC19.96■□□□□ 0.79
NANOGQ9H9S0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NANOGQ9H9S0 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.96■□□□□ 0.79
NANOGQ9H9S0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NANOGQ9H9S0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.96■□□□□ 0.79
NANOGQ9H9S0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.96■□□□□ 0.79
NANOGQ9H9S0 AC092171.4-201ENST00000609130 632 ntBASIC19.96■□□□□ 0.79
NANOGQ9H9S0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NANOGQ9H9S0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NANOGQ9H9S0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NANOGQ9H9S0 GABARAPL3-202ENST00000624044 1851 ntBASIC19.96■□□□□ 0.79
NANOGQ9H9S0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.96■□□□□ 0.79
NANOGQ9H9S0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NANOGQ9H9S0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NANOGQ9H9S0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.95■□□□□ 0.78
NANOGQ9H9S0 AP005212.1-201ENST00000581547 1997 ntBASIC19.95■□□□□ 0.78
NANOGQ9H9S0 PLK5-205ENST00000642079 1969 ntBASIC19.95■□□□□ 0.78
NANOGQ9H9S0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NANOGQ9H9S0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NANOGQ9H9S0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NANOGQ9H9S0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.95■□□□□ 0.78
NANOGQ9H9S0 SRD5A1P1-201ENST00000442297 786 ntBASIC19.95■□□□□ 0.78
NANOGQ9H9S0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NANOGQ9H9S0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NANOGQ9H9S0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.95■□□□□ 0.78
NANOGQ9H9S0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NANOGQ9H9S0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.95■□□□□ 0.78
NANOGQ9H9S0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 AP006587.3-201ENST00000525742 1516 ntBASIC19.94■□□□□ 0.78
NANOGQ9H9S0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 AC073314.1-201ENST00000568729 2216 ntBASIC19.94■□□□□ 0.78
NANOGQ9H9S0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.94■□□□□ 0.78
NANOGQ9H9S0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.93■□□□□ 0.78
NANOGQ9H9S0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NANOGQ9H9S0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.93■□□□□ 0.78
NANOGQ9H9S0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NANOGQ9H9S0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NANOGQ9H9S0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
NANOGQ9H9S0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NANOGQ9H9S0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NANOGQ9H9S0 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.93■□□□□ 0.78
NANOGQ9H9S0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.93■□□□□ 0.78
NANOGQ9H9S0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NANOGQ9H9S0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.93■□□□□ 0.78
NANOGQ9H9S0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NANOGQ9H9S0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms