Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 AC061975.6-201ENST00000579045 1553 ntBASIC21.54■■□□□ 1.04
RETREG1Q9H6L5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.54■■□□□ 1.04
RETREG1Q9H6L5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.54■■□□□ 1.04
RETREG1Q9H6L5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.54■■□□□ 1.04
RETREG1Q9H6L5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.54■■□□□ 1.04
RETREG1Q9H6L5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.54■■□□□ 1.04
RETREG1Q9H6L5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RETREG1Q9H6L5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RETREG1Q9H6L5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RETREG1Q9H6L5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RETREG1Q9H6L5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 UBE2DNL-204ENST00000602536 740 ntBASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 AL137784.2-201ENST00000607332 1000 ntBASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
RETREG1Q9H6L5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 SLC7A5P2-201ENST00000553010 536 ntBASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.52■■□□□ 1.04
RETREG1Q9H6L5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RETREG1Q9H6L5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 BID-214ENST00000617586 542 ntTSL 5 BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 AC092437.1-201ENST00000624794 1048 ntBASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG1Q9H6L5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 AC092666.2-201ENST00000613287 246 ntBASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
RETREG1Q9H6L5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms