Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ZCCHC4Q9H5U6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
ZCCHC4Q9H5U6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
ZCCHC4Q9H5U6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 AP005212.1-201ENST00000581547 1997 ntBASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.47■□□□□ 0.55
ZCCHC4Q9H5U6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC4Q9H5U6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC4Q9H5U6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC4Q9H5U6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC4Q9H5U6 AC010525.1-201ENST00000585559 441 ntBASIC18.46■□□□□ 0.55
ZCCHC4Q9H5U6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC4Q9H5U6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC4Q9H5U6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC4Q9H5U6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC4Q9H5U6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ZCCHC4Q9H5U6 AC007952.6-201ENST00000573168 2673 ntBASIC18.46■□□□□ 0.54
ZCCHC4Q9H5U6 AC003957.1-201ENST00000625108 2673 ntBASIC18.46■□□□□ 0.54
ZCCHC4Q9H5U6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 AL034346.1-201ENST00000568244 1277 ntBASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 AL512631.2-201ENST00000604634 923 ntBASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC4Q9H5U6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC4Q9H5U6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms