Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS33BQ9H267 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.66■■□□□ 1.7
VPS33BQ9H267 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS33BQ9H267 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS33BQ9H267 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS33BQ9H267 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS33BQ9H267 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.65■■□□□ 1.7
VPS33BQ9H267 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS33BQ9H267 PEX7-202ENST00000367756 680 ntTSL 3 BASIC25.65■■□□□ 1.7
VPS33BQ9H267 AC091799.1-201ENST00000422823 811 ntBASIC25.65■■□□□ 1.7
VPS33BQ9H267 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
VPS33BQ9H267 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC25.65■■□□□ 1.7
VPS33BQ9H267 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS33BQ9H267 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.65■■□□□ 1.7
VPS33BQ9H267 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC25.65■■□□□ 1.7
VPS33BQ9H267 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS33BQ9H267 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS33BQ9H267 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
VPS33BQ9H267 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS33BQ9H267 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
VPS33BQ9H267 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS33BQ9H267 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS33BQ9H267 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
VPS33BQ9H267 RNF121-214ENST00000533380 870 ntTSL 3 BASIC25.64■■□□□ 1.7
VPS33BQ9H267 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
VPS33BQ9H267 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.64■■□□□ 1.69
VPS33BQ9H267 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
VPS33BQ9H267 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.64■■□□□ 1.69
VPS33BQ9H267 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS33BQ9H267 CDV3P1-201ENST00000471403 739 ntBASIC25.63■■□□□ 1.69
VPS33BQ9H267 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
VPS33BQ9H267 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VPS33BQ9H267 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC25.63■■□□□ 1.69
VPS33BQ9H267 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
VPS33BQ9H267 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS33BQ9H267 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.63■■□□□ 1.69
VPS33BQ9H267 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.63■■□□□ 1.69
VPS33BQ9H267 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
VPS33BQ9H267 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
VPS33BQ9H267 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
VPS33BQ9H267 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC25.62■■□□□ 1.69
VPS33BQ9H267 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
VPS33BQ9H267 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.62■■□□□ 1.69
VPS33BQ9H267 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.62■■□□□ 1.69
VPS33BQ9H267 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.61■■□□□ 1.69
VPS33BQ9H267 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
VPS33BQ9H267 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
VPS33BQ9H267 AC087742.1-201ENST00000575880 1738 ntBASIC25.61■■□□□ 1.69
VPS33BQ9H267 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
VPS33BQ9H267 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
VPS33BQ9H267 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC25.61■■□□□ 1.69
VPS33BQ9H267 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
VPS33BQ9H267 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC25.61■■□□□ 1.69
VPS33BQ9H267 AL589743.5-201ENST00000616611 1050 ntBASIC25.61■■□□□ 1.69
VPS33BQ9H267 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC25.61■■□□□ 1.69
VPS33BQ9H267 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
VPS33BQ9H267 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
VPS33BQ9H267 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
VPS33BQ9H267 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
VPS33BQ9H267 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
VPS33BQ9H267 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
VPS33BQ9H267 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
VPS33BQ9H267 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
VPS33BQ9H267 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
VPS33BQ9H267 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
VPS33BQ9H267 AL355472.2-201ENST00000422958 438 ntBASIC25.6■■□□□ 1.69
VPS33BQ9H267 RPPH1-201ENST00000516869 333 ntBASIC25.6■■□□□ 1.69
VPS33BQ9H267 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC25.6■■□□□ 1.69
VPS33BQ9H267 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
VPS33BQ9H267 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC25.6■■□□□ 1.69
VPS33BQ9H267 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
VPS33BQ9H267 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.6■■□□□ 1.69
VPS33BQ9H267 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
VPS33BQ9H267 KRT17P3-201ENST00000420566 1262 ntBASIC25.59■■□□□ 1.69
VPS33BQ9H267 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC25.59■■□□□ 1.69
VPS33BQ9H267 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
VPS33BQ9H267 MIR4497-201ENST00000583208 89 ntBASIC25.59■■□□□ 1.69
VPS33BQ9H267 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
VPS33BQ9H267 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
VPS33BQ9H267 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
VPS33BQ9H267 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC25.58■■□□□ 1.69
VPS33BQ9H267 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.58■■□□□ 1.69
VPS33BQ9H267 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
VPS33BQ9H267 MCRIP2P1-201ENST00000394346 511 ntBASIC25.58■■□□□ 1.69
VPS33BQ9H267 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC25.58■■□□□ 1.69
VPS33BQ9H267 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC25.58■■□□□ 1.69
VPS33BQ9H267 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.58■■□□□ 1.69
VPS33BQ9H267 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC25.58■■□□□ 1.69
VPS33BQ9H267 RN7SL471P-201ENST00000580476 299 ntBASIC25.58■■□□□ 1.69
VPS33BQ9H267 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
VPS33BQ9H267 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VPS33BQ9H267 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VPS33BQ9H267 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VPS33BQ9H267 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VPS33BQ9H267 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
VPS33BQ9H267 PNMA6B-201ENST00000538162 1200 ntBASIC25.57■■□□□ 1.68
VPS33BQ9H267 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC25.57■■□□□ 1.68
VPS33BQ9H267 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.57■■□□□ 1.68
VPS33BQ9H267 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
VPS33BQ9H267 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms