Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 AC126544.1-201ENST00000580842 1059 ntBASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
NUCKS1Q9H1E3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 SMUG1P1-201ENST00000590640 811 ntBASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
NUCKS1Q9H1E3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
NUCKS1Q9H1E3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NUCKS1Q9H1E3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
NUCKS1Q9H1E3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
NUCKS1Q9H1E3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
NUCKS1Q9H1E3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NUCKS1Q9H1E3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NUCKS1Q9H1E3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
NUCKS1Q9H1E3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NUCKS1Q9H1E3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.77■■□□□ 1.24
NUCKS1Q9H1E3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
NUCKS1Q9H1E3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
NUCKS1Q9H1E3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
NUCKS1Q9H1E3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
NUCKS1Q9H1E3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.76■■□□□ 1.23
NUCKS1Q9H1E3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.76■■□□□ 1.23
NUCKS1Q9H1E3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.76■■□□□ 1.23
NUCKS1Q9H1E3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
NUCKS1Q9H1E3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NUCKS1Q9H1E3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.76■■□□□ 1.23
NUCKS1Q9H1E3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.76■■□□□ 1.23
NUCKS1Q9H1E3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.76■■□□□ 1.23
NUCKS1Q9H1E3 LINC01521-201ENST00000504184 1943 ntBASIC22.76■■□□□ 1.23
NUCKS1Q9H1E3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NUCKS1Q9H1E3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.76■■□□□ 1.23
NUCKS1Q9H1E3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.76■■□□□ 1.23
NUCKS1Q9H1E3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NUCKS1Q9H1E3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NUCKS1Q9H1E3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NUCKS1Q9H1E3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NUCKS1Q9H1E3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.75■■□□□ 1.23
NUCKS1Q9H1E3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NUCKS1Q9H1E3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NUCKS1Q9H1E3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
NUCKS1Q9H1E3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NUCKS1Q9H1E3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.75■■□□□ 1.23
NUCKS1Q9H1E3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NUCKS1Q9H1E3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms